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#4533 - BioC exported from INCEpTION cannot be imported again due to missing mandatory metadata #4536

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reckart
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@reckart reckart commented Feb 21, 2024

What's in the PR

  • Make sure that key, date and source are generated if they are not present in the CAS when writing BioC
  • Make reading BioC more robust so that it does not fail if key, date or source are missing

How to test manually

  • Export BioC from INCEpTION
  • Import it back again

Automatic testing

  • PR includes unit tests

Documentation

  • PR updates documentation

…missing mandatory metadata

- Make sure that key, date and source are generated if they are not present in the CAS when writing BioC
- Make reading BioC more robust so that it does not fail if key, date or source are missing
@reckart reckart added 🐛Bug Something isn't working Module: BioC labels Feb 21, 2024
@reckart reckart added this to the 31.2 milestone Feb 21, 2024
@reckart reckart self-assigned this Feb 21, 2024
@reckart reckart added this to 🏃‍♀️ In progress in Kanban via automation Feb 21, 2024
@reckart reckart merged commit e9e2d71 into release/31.x Feb 21, 2024
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Kanban automation moved this from 🏃‍♀️ In progress to 🍹 Done Feb 21, 2024
@reckart reckart deleted the bugfix/4533-BioC-exported-from-INCEpTION-cannot-be-imported-again-due-to-missing-mandatory-metadata branch February 21, 2024 18:41
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