Information technology notes and code snippets useful for computational biology.
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misc/python_examples
scripts
vmd
.gitignore
.sublime-build
Plumed+Gromacs.md
README.md
conda.md
cuda_gromacs.md
gh-jekyll.md
git.md
gmx_lomo.md
jupyter.md
lomo_quick.md
lomonosov.md
mac_conf.md
subl_conda.md
web_pages.md

README.md

IT notes

Useful IT notes and code snippets.

General

Molecular modeling

  • Installing VMD, see vmd

Supercomputing

  • Instructions on using Lomonosov/Lomonosov-2 supercomputer (in Russian) - here
  • Quick instructions - here
  • Running Gromacs on Lomonosov - here

Web technologies

  • How to create web-site using GitHub pages and Jekyll gh-jekyll