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IT notes

Useful IT notes and code snippets.

For new members of the group

  • Pls, follow these instructions to connect to the IT infrastructure new_member.md

General

Molecular modeling

  • Installing VMD, see vmd

Newton

Supercomputing

  • Instructions on using Lomonosov/Lomonosov-2 supercomputer (in Russian) - here
  • Quick instructions - here
  • Running Gromacs on Lomonosov - here
  • Running Gromacs with Plumed on Lomonosov - here
  • Compiling Gromacs with Plumed on Lomonosov - here

Web technologies

  • How to create web-site using GitHub pages and Jekyll gh-jekyll

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Information technology notes and code snippets useful for computational biology.

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