fix all broken links

intermine · Jul 31, 2019 · 5caa059 · 5caa059
1 parent c1c32ea
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Showing 8 changed files with 9 additions and 12 deletions.
diff --git a/docs/database/data-sources/custom/index.rst b/docs/database/data-sources/custom/index.rst
@@ -98,7 +98,7 @@ The `project.xml` configuration is as below:
       <property name="src.data.dir.includes" value="*.xml"/>
     </source>
 
-See :doc:`/database/data-sources/versions` for details on how to version your data parser.
+See :doc:`/database/data-sources/custom/dataparser-versions` for details on how to version your data parser.
 
 Additional Properties in Project XML
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

diff --git a/docs/database/database-building/project-xml.rst b/docs/database/database-building/project-xml.rst
@@ -26,7 +26,7 @@ Specific operations can be performed on the Mine once data is loaded, these are
 Versions
 ------------
 
-Each data source has its own version. See :doc:`/database/data-sources/versions` for details on how to version your own data sources and how to specify which versions to use.
+Each data source has its own version. See :doc:`/database/data-sources/custom/dataparser-versions` for details on how to version your own data sources and how to specify which versions to use.
 
 Data model
 ------------

diff --git a/docs/embedding/apps-c/elastic-med.rst b/docs/embedding/apps-c/elastic-med.rst
@@ -572,8 +572,7 @@ Application search template
 
 This template will be rendered for the ``app-search`` component defined on the index page. In ``src/templates/search.mustache``:
 
-.. code-block:: mustache
-   :linenos:
+.. code-block:: javascript
 
     <div class="row collapse">
         <div class="large-10 columns search">

diff --git a/docs/embedding/report-widgets.rst b/docs/embedding/report-widgets.rst
@@ -1,5 +1,5 @@
 Report Widgets
 ==============
 
-Have been retired and made into something better. Use :doc:`Report Displayers <webapp/report-page/report-displayers>` instead.
+Have been retired and made into something better. Use :doc:`Report Displayers </webapp/report-page/report-displayers>` instead.
 
diff --git a/docs/get-started/tutorial/webapp.rst b/docs/get-started/tutorial/webapp.rst
@@ -74,7 +74,7 @@ If your changes are still not being reflected in your webapp, add the `clean` ta
 
 This removes all temporary directories so you are certain your new files are being used. 
 
-See :doc:`/system-requirements/software/gradle/` for a list of all available Gradle tasks.
+See :doc:`/system-requirements/software/gradle/index` for a list of all available Gradle tasks.
 
 Subtitle and Release version
 ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^

diff --git a/docs/intermine/upgrade.rst b/docs/intermine/upgrade.rst
@@ -22,7 +22,7 @@ To get patch updates automatically, use the plus (+) notation:
 	systemProp.imVersion=4.0.+
 	systemProp.bioVersion=4.0.+
 
-Read more: :doc:`</intermine/intermine-versions.rst>` and :doc:`</intermine/roadmap.rst>`
+Read more: :doc:`</intermine/intermine-versions>` and :doc:`</intermine/roadmap>`
 
 InterMine 4.0.0
 ---------------------
@@ -317,8 +317,6 @@ To pull changes in your local repository and merge them into your working files:
 
 	$ git pull upstream
 
-If you don't have a git repo yet, see :doc:`/git/index` for details.
-
 If you host a copy of the :doc:`CDN </webapp/performance/index>`, then you should also pull in changes from
 that repository.
 
@@ -454,7 +452,7 @@ Or this (See `#912 <https://github.com/intermine/intermine/issues/912>`_)
 
 	Unable to get sub-ObjectStore for Translating ObjectStore
 
-See :doc:`/get-started/hikaricp` for details.
+See :doc:`/system-requirements/software/postgres/hikari` for details.
 
 InterMine-model Refactor
 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~

diff --git a/docs/system-requirements/software/gradle/FAQs.rst b/docs/system-requirements/software/gradle/FAQs.rst
@@ -6,7 +6,7 @@ Gradle - FAQs
 
 `Gradle <https://gradle.org>`_ is InterMine's build tool. In InterMine 2.0 Gradle replaced ant.
 
-Please see :doc:`Upgrade instructions </support/upgrade>` for details on how to migrate your system to use Gradle and :doc:`Gradle Quick Start </system-requirements/software/gradle/index>` for common Gradle commands.
+Please see :doc:`Upgrade instructions </intermine/upgrade>` for details on how to migrate your system to use Gradle and :doc:`Gradle Quick Start </system-requirements/software/gradle/index>` for common Gradle commands.
 
 
 I got an error: "Caused by: java.security.InvalidKeyException: EC parameters error"

diff --git a/docs/webapp/query-results/index.rst b/docs/webapp/query-results/index.rst
@@ -50,7 +50,7 @@ explicitly:
 
   intermine.setOptions({icons: 'fontawesome'}, '.Style');
 
-To apply this setting in your current web-app, see :doc:`/webapp/properties/javascript-properties`.
+To apply this setting in your current web-app, see :doc:`/webapp/properties/javascript-options`.
 
 
 The initial state of Sub-Tables