Update reactome.rst

intermine · Jan 30, 2015 · 8c3f51b · 8c3f51b
1 parent 49b0c73
commit 8c3f51b
Showing 1 changed file with 5 additions and 8 deletions.
diff --git a/docs/database/data-sources/library/pathways/reactome.rst b/docs/database/data-sources/library/pathways/reactome.rst
@@ -5,12 +5,12 @@ Reactome
 Types of data loaded
 --------------------
 
-genes, pathways
+proteins, genes, pathways
 
 How to download the data 
 ---------------------------
 
-http://reactome.org/download/current/biopax.zip
+http://www.reactome.org/download/current/UniProt2Reactome_All_Levels.txt
 
 How to load the data into your mine
 --------------------------------------
@@ -19,12 +19,9 @@ project XML example
 
 .. code-block:: xml
 
-    <source name="reactome" type="biopax">
-      <property name="src.data.dir" location="/data/reactome"/>
-      <property name="biopax.organisms" value="7227"/>
-      <property name="biopax.datasourcename" value="Reactome"/>
-      <property name="biopax.datasetname" value="Reactome data set"/>
-      <property name="biopax.curated" value="false"/>
+    <source name="reactome" type="reactome">
+      <property name="src.data.dir" location="/data/reactome" />
+      <property name="reactome.organisms" value="9606 10090" />
     </source>
 
 .. index:: Reactome