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This is now possible via the use of bundle aliases, which get injected into webpack.config.js. The way to go is that in your overlay, you define your own Webpack bundle, and define a ../../theme.config alias pointing to your overlay's theme.config file.
Currently, we hard-code the on from
invenio-themes
in the resolver as an alias: https://github.com/inveniosoftware/invenio-assets/pull/115/files#diff-7041ec923e4ebff4bd440b0171487e16R30This should be injected somehow from Flask into the Webpack config, to also allow other bundles to override it and provide their own...
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