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Merge Dev brach to bring new developments to master #175

Merged
merged 95 commits into from
Jul 2, 2021
Merged

Merge Dev brach to bring new developments to master #175

merged 95 commits into from
Jul 2, 2021

Commits on Apr 22, 2021

  1. Added R5's isochrone feature to r5r

    @mvpsaraiva
    mvpsaraiva committed Apr 22, 2021
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  2. Added R5's isochrone feature to r5r

    @mvpsaraiva
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Commits on Apr 27, 2021

  1. Added support for elevation weighting of street edges.

    @mvpsaraiva
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  2. Merge branch 'isochrone' into dev 

    # Conflicts:
#	java-r5rcore/src/org/ipea/r5r/R5RCore.java
    @mvpsaraiva
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  3. Deleting merge conflicts

    @mvpsaraiva
    mvpsaraiva committed Apr 27, 2021
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  4. Changed java build configuration

    @mvpsaraiva
    mvpsaraiva committed Apr 27, 2021
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Commits on Apr 28, 2021

  1. Working on isochrones function (R and Java)

    @mvpsaraiva
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  2. Load elevation data when a DEM file in .tif format is found in the da… 

    …ta_path directory, in `setup_r5()`
    @mvpsaraiva
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  3. Fixed elevation utils and isochrone function

    @mvpsaraiva
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  4. Elevation and isochrone functions maintenance and documentation

    @mvpsaraiva
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  5. Fixed conversion of travel times from minutes to seconds in Isochrones

    @mvpsaraiva
    mvpsaraiva committed Apr 28, 2021
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Commits on Apr 29, 2021

  1. Updated r5r Jar to version 0.5-0

    @mvpsaraiva
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Commits on May 3, 2021

  1. Improving detailed_itineraries 

    Fixing bug where topography was not considered when walking between transit stops
    @mvpsaraiva
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Commits on May 4, 2021

  1. Updating calculation of transfer times between transit stops

    @mvpsaraiva
    mvpsaraiva committed May 4, 2021
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  2. Merge branch 'master' into dev

    @mvpsaraiva
    mvpsaraiva committed May 4, 2021
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  3. Initial refactoring (not working)

    @mvpsaraiva
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Commits on May 5, 2021

  1. Added dependency to purrr package 

    Added variables to globalVariables list in zzz, to avoid warning messages
Fixed bug where direct walking and cycling trips were not returned by detailed_itineraries
    @mvpsaraiva
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  2. Setting verbose = FALSE in test-detailed_itineraries (reverting back … 

    …to original)
    @mvpsaraiva
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  3. Created Utils class with static methods, to streamline R5RCore class

    @mvpsaraiva
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  4. Refactoring: moving excess code from R5RCore to other classes

    @mvpsaraiva
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  5. Refactoring: moving excess code from R5RCore to other classes

    @mvpsaraiva
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  6. Refactoring: function to create RegionalTask

    @mvpsaraiva
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  7. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Focus on IsochroneBuilder class
    @mvpsaraiva
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  8. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Focus on IsochroneBuilder class
    @mvpsaraiva
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  9. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Reorganising folder structure
    @mvpsaraiva
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  10. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Reorganising folder structure
    @mvpsaraiva
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  11. Code cleanup

    @mvpsaraiva
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  12. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Focus on StreetNetwork class, used by `street_network_to_sf()`
    @mvpsaraiva
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  13. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Moved code from IsochroneBuilder to R5Process superclass, which will be shared with TravelTimeMatrixComputer and DetailedItineraryPlanner
    @mvpsaraiva
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Commits on May 6, 2021

  1. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Focus on DetailedItineraryPlanner
    @mvpsaraiva
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  2. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Focus on TravelTimeMatrixComputer
    @mvpsaraiva
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  3. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Focus on TravelTimeMatrixComputer
    @mvpsaraiva
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  4. Refactoring: function to create RegionalTaskRefactoring: moving exces… 

    …s code from R5RCore to other classes

- Abstracting elements of TravelTimeMatrixComputer and DetailedItineraryPlanner to super classes
    @mvpsaraiva
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  5. Code cleanup

    @mvpsaraiva
    mvpsaraiva committed May 6, 2021
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  6. Code cleanup

    @mvpsaraiva
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  7. Added SnapFinder feature to Java core, to verify results of R5 snappi… 

    …ng points to road network
    @mvpsaraiva
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Commits on May 7, 2021

  1. Improvements in SnapFinder 

    Added feature to build a regular grid covering the street network
    @mvpsaraiva
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  2. Added snap_distance and search_radius to the results of SnapFinder

    @mvpsaraiva
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  3. Removed board_time and alight_time from detailed itineraries due to s… 

    …ome inconsistencies.
    @mvpsaraiva
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  4. Refactoring and code cleanup of TravelTimeMatrixComputer

    @mvpsaraiva
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  5. Merge pull request #166 from ipeaGIT/r5r_java_refactoring 

    Java refactoring
    @mvpsaraiva
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  6. updated r5r_jar

    @mvpsaraiva
    mvpsaraiva committed May 7, 2021
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  7. Updated R5RCore isochrone function to account for missing input case:… 

    … single origin point and many cutoff
    @mvpsaraiva
    mvpsaraiva committed May 7, 2021
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  8. Code cleanup

    @mvpsaraiva
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Commits on May 10, 2021

  1. updated gitignore

    @mvpsaraiva
    mvpsaraiva committed May 10, 2021
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  2. Updated jar

    @mvpsaraiva
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Commits on May 11, 2021

  1. Modified getSnapPoints function to call R5's findSplit function directly

    @mvpsaraiva
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  2. Modified test_snap

    @mvpsaraiva
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Commits on May 12, 2021

  1. Modified test_snap

    @mvpsaraiva
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Commits on May 13, 2021

  1. Added AccessibilityEstimator to r5r core

    @mvpsaraiva
    mvpsaraiva committed May 13, 2021
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  2. New accessibility estimation feature

    @mvpsaraiva
    mvpsaraiva committed May 13, 2021
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  3. Updated documentation

    @mvpsaraiva
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Commits on May 14, 2021

  1. Updated AccessibilityEstimator, with added support for decay functions.

    @mvpsaraiva
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  2. getGrid() function now returns each cell's geometry alongside it's … 

    …centroid coordinates
    @mvpsaraiva
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  3. Removed dependency on %>% from setup_r5

    @mvpsaraiva
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  4. getGrid() function now returns each cell's geometry alongside it's … 

    …centroid coordinates
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Commits on May 17, 2021

  1. Modified the StreetNetwork class, used by street_network_to_sf(), t… 

    …o remove extra edges and vertices that represent only transit stops. Those edges produced weird artefacts around the sample datasets provided when using `street_network_to_sf()`.
    @mvpsaraiva
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Commits on May 18, 2021

  1. Update documentation

    @mvpsaraiva
    mvpsaraiva committed May 18, 2021
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  2. Updated assert_points() function to accept: 

    - data.frame with id, lat, and lon columns
- sf POINTS, which are converted to lat lon
- other sf, which are converted to centroids

The reason for this update is so that `detailed_itineraries()`, `travel_time_matrix()`, and `accessibility()` functions can accept the output of `get_grid()`
Obs: currently not passing tests
    @mvpsaraiva
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Commits on May 21, 2021

  1. Added find_snap() R wrapper function around Java's findSnapPoints() 

    Added `use_elevation` parameter to `setup_r5()`, defaulting to FALSE. Also added a disclaimer message that support for elevation in r5r is experimental.
    @mvpsaraiva
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  2. Removed n_threads parameter from find_snap().

    @mvpsaraiva
    mvpsaraiva committed May 21, 2021
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  3. Removed isochrones() function

    @mvpsaraiva
    mvpsaraiva committed May 21, 2021
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  4. Reverted changes to assert_points_input()

    @mvpsaraiva
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  5. Fixed data.table call in find_snap()

    @mvpsaraiva
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Commits on May 24, 2021

  1. Documents and tests find_snap() fun. Closes #168

    @rafapereirabr
    rafapereirabr committed May 24, 2021
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  2. update documentation

    @rafapereirabr
    rafapereirabr committed May 24, 2021
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Commits on May 27, 2021

  1. Added check for opportunities_column name and value in `accessibili… 

    …ty()` function.

Added `assert_decay_function()` in utils.R to check for valid inputs for `decay_function` and `decay_value` parameters.
    @mvpsaraiva
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  2. Updated documentation of accessibility() function

    @mvpsaraiva
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  3. Cleaned tests_marcus folder

    @mvpsaraiva
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  4. Update documentation

    @mvpsaraiva
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  5. Added simple implementation of a progress indicator, activated when `… 

    …verbose = FALSE` (Issue #150).

Small tweaks in the documentation.
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  6. Added get() back to selection of opportunities column in accessibil… 

    …ity function.
    @mvpsaraiva
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  7. Updated progress bar message.

    @mvpsaraiva
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  8. Fixed verbose mode in detailed_itineraries()

    @mvpsaraiva
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Commits on Jun 28, 2021

  1. Removed get() from data.table col when accessing `opportunities_col… 

    …name`
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  2. Changed syntax for accessing opportunities_colname from data.table

    @mvpsaraiva
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  3. test accessibility

    @rafapereirabr
    rafapereirabr committed Jun 28, 2021
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  4. add test-accessibility.R

    @rafapereirabr
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Commits on Jun 29, 2021

  1. Added max_bike_dist to travel_time_matrix, detailed_itineraries… 

    …, and `accessibility functions`. Issue #174
    @mvpsaraiva
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  2. Updated documentation

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  3. Merge branch 'dev' of https://github.com/ipeaGIT/r5r into dev

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  4. Updated documentation

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  5. Added max_bike_dist parameter to accessibility(), `travel_time_ma… 

    …trix()`, and `detailed_itineraries()` tests. Issue #174
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Commits on Jul 1, 2021

  1. update NEWS. Add new max_bike_dist Closes #174

    @rafapereirabr
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  2. test elevation_utils.R

    @rafapereirabr
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  3. improve coverage of setup_r5

    @rafapereirabr
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  4. Closes #169. Closes 169

    @rafapereirabr
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  5. fix elevation test

    @rafapereirabr
    rafapereirabr committed Jul 1, 2021
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  6. fix typo

    @rafapereirabr
    rafapereirabr committed Jul 1, 2021
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  7. reduced the size of poa's gtfs file

    @dhersz
    dhersz committed Jul 1, 2021
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  8. Merge remote-tracking branch 'origin/dev' into dev

    @dhersz
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  9. run checks on dev as well

    @dhersz
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  10. imports raster

    @dhersz
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  11. add rgdal as a "suggests" dependency

    @dhersz
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  12. removed redundant raster dependency lol

    @dhersz
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