Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Multi-threading option for running decontamination analysis #78

Closed
mezewudo opened this issue Aug 13, 2020 · 2 comments
Closed

Multi-threading option for running decontamination analysis #78

mezewudo opened this issue Aug 13, 2020 · 2 comments

Comments

@mezewudo
Copy link

Please, is there any command option for running the nextflow decontamination using multiple threads, to speed up the analysis?

@martinghunt
Copy link
Member

Yes, there's a nextflow command line option. eg --mapping_threads 10 for 10 threads.

@mezewudo
Copy link
Author

Great, thanks!

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants