Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Output SNPs in some form #58

Closed
babayagaofficial opened this issue May 24, 2024 · 0 comments
Closed

Output SNPs in some form #58

babayagaofficial opened this issue May 24, 2024 · 0 comments
Labels
enhancement New feature or request

Comments

@babayagaofficial
Copy link
Collaborator

As we calculate SNPs pairwise anyway, and people like to use SNP distances for various reasons, might be worth adding a flag that saves SNP output in some way. Possible options:

  1. just save nucmer output
  2. write out snp distance for each pair as well as dcj (will be faster as not writing all the nucmer output)
@babayagaofficial babayagaofficial added the enhancement New feature or request label May 24, 2024
@babayagaofficial babayagaofficial closed this as not planned Won't fix, can't repro, duplicate, stale Aug 22, 2024
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
enhancement New feature or request
Projects
None yet
Development

No branches or pull requests

1 participant