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[Feature Request] Add support for the
--link-exchange-rates
option in the MAST model
#285
opened Jul 26, 2024 by
StefanFlaumberg
Despite passing
--output-multifurcating-tree
, resulting tree is bifurcating, when run in cmaple mode
#283
opened Jul 25, 2024 by
corneliusroemer
--polytomy
flag seems to be ignored when iqtree is using cmaple
#281
opened Jul 25, 2024 by
corneliusroemer
Paired bootstrap values in a .treefile without having specified -alrt
#279
opened Jul 19, 2024 by
davidfbibby
doc: code not well formatted for macosx compilation guide
#276
opened Jul 17, 2024 by
corneliusroemer
Build issues on macOS 14.5:
error: call to 'gettimeofday' is ambiguous
#275
opened Jul 17, 2024 by
corneliusroemer
Suggestion: Error instead of warn if
--pathogen-force
is set but cmaple not integrated
#274
opened Jul 17, 2024 by
corneliusroemer
Document in help string that
--nt
/-c
/-T
/--threads
are synonyms, print always -T
instead of -nt
#273
opened Jul 17, 2024 by
corneliusroemer
Crash due to assertion failure in
PhyloSuperTreePlen::computeFuncDerv
#270
opened Jul 8, 2024 by
davidcerny
Add option to force-unroot input trees
enhancement
New feature or request
#251
opened Jun 28, 2024 by
roblanf
[Feature Request] Add site-specific rate profile support
enhancement
New feature or request
#244
opened Jun 25, 2024 by
StefanFlaumberg
Replace the zlib library with zstd or lz4
enhancement
New feature or request
#243
opened Jun 24, 2024 by
bqminh
IQ-TREE CRASHES WITH SIGNAL ABORTED: -czb threshold specification
#232
opened Jun 17, 2024 by
DFornasiero
IQTree::optimizeNNI(bool): Assertion `curScore > appliedNNIs.at(0).newloglh - 0.1' failed.
#230
opened Jun 17, 2024 by
OliveiraDS-hub
Feature request: Generate MrBayes block from IQ-TREE
enhancement
New feature or request
#195
opened May 14, 2024 by
eosthusiast
Enhancement request: Implement +ASC option to speed up MixtureFinder searches on supermatrices lacking constant sites
enhancement
New feature or request
#181
opened Apr 25, 2024 by
vinuesa
Segmentation fault when trying to use lds2 with predefined substitution rates
#167
opened Mar 22, 2024 by
jkimsis
Cannot find ALISIM model information as outlined in concordance tutorial
#156
opened Jan 6, 2024 by
aldendirks
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