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Merge pull request #727 from isb-cgc/staging
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Staging
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DeenaBleich committed May 18, 2023
2 parents bed42db + c59db90 commit c0d732c
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5 changes: 5 additions & 0 deletions docs/source/sections/ReleaseNotes/WebAppReleaseNotes.rst
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ISB-CGC Web App Release Notes
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*May 3, 2023*

- On the Cancer Data File Browser, Build has been moved from being a separate filter, to being one of the selection attributes.

*September 8, 2021*

- On the ISB-CGC home page, the banner with the link to the survey has been removed.
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4 changes: 1 addition & 3 deletions docs/source/sections/webapp/Saved-Cohorts.rst
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You can use "Show", "Page", "Previous" and "Next" to navigate through the list. The columns are sortable by selecting the column header. You can select a subset of the default columns to show by using the "Choose Columns to Display" tool.

You can filter by Genomic Build (HG19 or HG38) and view which platforms and files are available for the build selected.

You can filter by full or partial Case Barcode on all tabs. To remove the search key word, click the "X" button adjacent to it. Filtering by Case Barcode updates the number to the right of all the other filters.

You may also filter by data type, data format, platform, disease code, disease strategy, and/or experimental strategy. Selecting a filter will update the associated list. The numbers next to the filter refers to the number of files available for that filter.
You may also filter by data type, data category, data format, platform, program, disease code, disease strategy, node (GDC, PDC), build (Hg38, Hg19) and/or experimental strategy. Selecting a filter will update the associated list. The numbers next to the filter refers to the number of files available for that filter.

The tabs "IGV", "Pathology Images" and "Radiology Images" allow you to filter for files that show you respectively read-level sequence data (viewed using the IGV viewer), pathology images, and radiology images. Please note: only if you have authenticated as a dbGaP authorized user will you be able to select controlled access files to view in the IGV viewer (CCLE data does not require authorization to view the sequence data in the IGV viewer). Details of how to view Sequences, and Pathology and Radiology Images are provided below.

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