epimutacions is an R/Biconductor package. The package provides
6 statistical methods for outlier detection in DNA methylation data.
It also contains function for results visualization and annotation.
The epimutacions package can be installed using the following code:
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("epimutacions")
The epimutacions package depends on epimutacionsData
package which can be installed as following:
if (!requireNamespace("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("epimutacionsData")
- See vignette: shorturl.at/gwFOQ
This project is funded by la Fundació de la Marató de TV3 within the project iGenCO (Grant number 504/C/2020).
The authors would like to thank the team who collaborated in the initial design of the package in the European BioHackathon 2020: Lordstrong Akano, James Baye, Alejandro Caceres, Pavlo Hrab, Raquel Manzano and Margherita Mutarelli.
The authors also want to thank the organization of European BioHackathon 2020 for its support.
- Dolors Pelegri-Siso: dolors.pelegri@isglobal.org
- Juan R. Gonzalez: juanr.gonzalez@isglobal.org
- Carlos Ruiz-Arenas: carlos.ruiza@upf.edu
- Carles Hernandez-Ferrer: carles.hernandez@cnag.crg.eu