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Update changelog and version.txt for v2.9.9 (#1307)
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joshuacwnewton committed Dec 12, 2023
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## v2.9.9 (2023-12-11)
[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.9.8...release)

**FEATURE**
- Introduce `segment_image` CLI. [View pull request](https://github.com/ivadomed/ivadomed/pull/1254)

**CI**
- chore: remove ubuntu-18.04 and python 3.7 from `run_tests` workflow. [View pull request](https://github.com/ivadomed/ivadomed/pull/1298)

**BUG**
- chore: Dependency Maintenance (imageio 2->3, pyBIDS<0.15.6, readthedocs.yml v2, Python 3.7->3.8). [View pull request](https://github.com/ivadomed/ivadomed/pull/1297)
- Fix NormalizeInstance for uniform samples. [View pull request](https://github.com/ivadomed/ivadomed/pull/1267)

**INSTALLATION**
- Test out newer versions of PyTorch (`torch>=2.0.0`) for compatibility with downstream projects (SCT, ADS). [View pull request](https://github.com/ivadomed/ivadomed/pull/1304)

**DOCUMENTATION**
- Update doc for segment_image.py. [View pull request](https://github.com/ivadomed/ivadomed/pull/1290)
- Clarified usage for `fname_split`. [View pull request](https://github.com/ivadomed/ivadomed/pull/1283)
- Point to the URL specific to the learning rate. [View pull request](https://github.com/ivadomed/ivadomed/pull/1281)
- Match location of `object_detection` in the template config file and in the documentation. [View pull request](https://github.com/ivadomed/ivadomed/pull/1278)
- Resolve the discrepancies. [View pull request](https://github.com/ivadomed/ivadomed/pull/1271)
- Clarify usage of --no-patch for 2D only. [View pull request](https://github.com/ivadomed/ivadomed/pull/1265)

**ENHANCEMENT**
- Do not use wandb if not specified in the config file. [View pull request](https://github.com/ivadomed/ivadomed/pull/1253)

**REFACTORING**
- Harmonize get_item in MRI2D dataset and MRI3D dataset. [View pull request](https://github.com/ivadomed/ivadomed/pull/1266)

## v2.9.8 (2023-01-04)
[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.9.7...release)

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2.9.8
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