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Update changelog and version (2.9.7) (#1205)
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mariehbourget committed Nov 1, 2022
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## v2.9.7 (2022-10-31)
[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.9.6...release)

**FEATURE**

- feat: update default args for `wandb.login()`. [View pull request](https://github.com/ivadomed/ivadomed/pull/1193)
- Add Config Parameter to Disable Validation When Loading BIDS Info. [View pull request](https://github.com/ivadomed/ivadomed/pull/1168)
- Add auto disk cache capability to mri2d and mri3d dataset classes. [View pull request](https://github.com/ivadomed/ivadomed/pull/1121)
- Segment 2D images without patches. [View pull request](https://github.com/ivadomed/ivadomed/pull/1101)

**CI**

- chore: add an upper bound version specifier for pandas to prevent breaking the tests. [View pull request](https://github.com/ivadomed/ivadomed/pull/1194)
- Drop testing on macOS 10. [View pull request](https://github.com/ivadomed/ivadomed/pull/1190)
- Only run tests on code changes. [View pull request](https://github.com/ivadomed/ivadomed/pull/1186)
- chore: upgrade run_tests workflow. [View pull request](https://github.com/ivadomed/ivadomed/pull/1146)
- Don't install ivadomed just to run pre-commit checks.. [View pull request](https://github.com/ivadomed/ivadomed/pull/1145)

**BUG**

- chore: add an upper bound version specifier for pandas to prevent breaking the tests. [View pull request](https://github.com/ivadomed/ivadomed/pull/1194)
- Drop testing on macOS 10. [View pull request](https://github.com/ivadomed/ivadomed/pull/1190)
- Resolve imageio v2->v3 imread deprecation warnings. [View pull request](https://github.com/ivadomed/ivadomed/pull/1181)
- fix: adapt the filenames of the predictions in pred_masks as per target_suffix. [View pull request](https://github.com/ivadomed/ivadomed/pull/1173)
- Fix long evaluation time on microscopy images. [View pull request](https://github.com/ivadomed/ivadomed/pull/1081)

**INSTALLATION**

- chore: update installation for ivadomed tutorials. [View pull request](https://github.com/ivadomed/ivadomed/pull/1200)
- Remove deprecated torch and dev installation instructions. [View pull request](https://github.com/ivadomed/ivadomed/pull/1179)
- Get Rid of Python 3.6. [View pull request](https://github.com/ivadomed/ivadomed/pull/1149)
- Support python3.10. [View pull request](https://github.com/ivadomed/ivadomed/pull/1137)

**DOCUMENTATION**

- fix: update link to contribution guidelines. [View pull request](https://github.com/ivadomed/ivadomed/pull/1196)
- Tests README: Add instructions to install testing-related packages. [View pull request](https://github.com/ivadomed/ivadomed/pull/1180)
- Remove deprecated torch and dev installation instructions. [View pull request](https://github.com/ivadomed/ivadomed/pull/1179)
- Add description and default values to some parameters.. [View pull request](https://github.com/ivadomed/ivadomed/pull/1174)
- Add Note in WandB. [View pull request](https://github.com/ivadomed/ivadomed/pull/1171)

**DEPENDENCIES**

- chore: add an upper bound version specifier for pandas to prevent breaking the tests. [View pull request](https://github.com/ivadomed/ivadomed/pull/1194)
- Support python3.10. [View pull request](https://github.com/ivadomed/ivadomed/pull/1137)

**ENHANCEMENT**

- feat: update default args for `wandb.login()`. [View pull request](https://github.com/ivadomed/ivadomed/pull/1193)
- Only run tests on code changes. [View pull request](https://github.com/ivadomed/ivadomed/pull/1186)
- Transformation on Subvolume for mri3d_subvolume_segmentation_dataset. [View pull request](https://github.com/ivadomed/ivadomed/pull/1169)
- Support python3.10. [View pull request](https://github.com/ivadomed/ivadomed/pull/1137)
- Add syntax highlighting and improve flow of the Colab tutorials. [View pull request](https://github.com/ivadomed/ivadomed/pull/1127)
- Add auto disk cache capability to mri2d and mri3d dataset classes. [View pull request](https://github.com/ivadomed/ivadomed/pull/1121)

**TESTING**

- Drop testing on macOS 10. [View pull request](https://github.com/ivadomed/ivadomed/pull/1190)
- Only run tests on code changes. [View pull request](https://github.com/ivadomed/ivadomed/pull/1186)
- Add syntax highlighting and improve flow of the Colab tutorials. [View pull request](https://github.com/ivadomed/ivadomed/pull/1127)

**REFACTORING**

- feat: update default args for `wandb.login()`. [View pull request](https://github.com/ivadomed/ivadomed/pull/1193)
- Convert pred data to uint8 prior to imwrite png. [View pull request](https://github.com/ivadomed/ivadomed/pull/1185)
- Minor correction to unsupported file extension error message. [View pull request](https://github.com/ivadomed/ivadomed/pull/1177)

## v2.9.6 (2022-06-02)
[View detailed changelog](https://github.com/ivadomed/ivadomed/compare/v2.9.5...release)

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2.9.6
2.9.7

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