Merge pull request #46 from j-andrews7/1.2.2

Update to v1.2.2.

CHANGELOG.md

@@ -1,5 +1,13 @@
 ## Change log
 
+### _**v1.2.2**_
+**Release date: August 17th, 2019**
+ - Upgraded a bunch of dependency versions to fix most security issues [#43](https://github.com/j-andrews7/Genotify/issues/43).
+ - Upgraded to Electron 3.1.13, which fixed the menu bar being impossible to see on linux [#45](https://github.com/j-andrews7/Genotify/issues/45).
+ - Fixed a bug that caused the Hits datatable to throw mad errors when hits had no symbol provided [#44](https://github.com/j-andrews7/Genotify/issues/44).
+ - Fixed a long standing bug due to multiple Uniprot IDs being returned. This caused errors in retrieving the Uniprot Summary and ProtVista data [#40](https://github.com/j-andrews7/Genotify/issues/40).
+ - Fix issues building from source on linux [#42](https://github.com/j-andrews7/Genotify/issues/42) - thanks to @hmontenegro for reporting and help troubleshooting.
+
 ### _**v1.2.1**_
 **Release date: August 15th, 2018**
  - Added a link back to CTDbase in the disease associations table.

README.md

@@ -24,7 +24,9 @@ This program aims to give you access to all of the resources you could ever want
 ---
 
 ## Installation
-Just download the [release](https://github.com/j-andrews7/GenotifyDesktop/releases) for your OS, unpack, and run. To build from source with `node.js`, you can clone the repo and run `npm install` followed by `npm start`.
+Just download the [release](https://github.com/j-andrews7/GenotifyDesktop/releases) for your OS, unpack, and run. To build from source with `node.js`, you can clone the repo and run `npm install` followed by `npm start`. 
+
+If you run into `permissin denied` errors during the postinstall script, try adding the `--unsafe-perm=true --allow-root` arguments.
 
 ## Basic Usage
 Genotify is dead simple to use. Type a query into the search box and click the search button, hit enter, or use the hotkey `ctrl+q` (or `cmd+q`) to query from clipboard (even if Genotify isn't focused!). Search for and select species with the species filter, or filter hits in the hits table dynamically. Clicking on a different hit in the hits table will show the information for that hit. Expand the various sections to read what said gene does, explore expression data, see disease associations, or view links out to various data sources. Clicking on a text box will copy its contents to your clipboard for easy copying.

index.html

@@ -239,7 +239,7 @@ <h3 class="sect-header" data-toggle="collapse" data-target="#db-div,#db2-div" id
         </div>
     </div>
     <div class="footer">
-        <p>&copy; 2018 Payton Lab - Powered by <a href="http://mygene.info">MyGene.info</a>, <a href="https://www.ebi.ac.uk/gxa/home">EBI Expression Atlas</a>, <a href="http://ctdbase.org">CTDbase</a>, <a href="https://www.wormbase.org">WormBase</a>, and <a href="https://www.uniprot.org/">UniProtKB.</a></p>
+        <p>&copy; 2019 Payton Lab - Powered by <a href="http://mygene.info">MyGene.info</a>, <a href="https://www.ebi.ac.uk/gxa/home">EBI Expression Atlas</a>, <a href="http://ctdbase.org">CTDbase</a>, <a href="https://www.wormbase.org">WormBase</a>, and <a href="https://www.uniprot.org/">UniProtKB.</a></p>
     </div>
 </body>
 

main.js

@@ -25,7 +25,8 @@ function createWindow() {
     height: 1200,
     minWidth: 450,
     icon: path.join(__dirname, 'assets/icons/png/64x64.png'),
-    show: false
+    show: false, 
+    title: "Genotify"
   });
 
   // Splash screen.
@@ -147,7 +148,7 @@ function createMenu() {
       label: 'How to Use',
       click() {
         require('electron').shell.openExternal(
-          'https://github.com/j-andrews7/GenotifyDesktop/')
+          'https://github.com/j-andrews7/Genotify/')
       }
     }]
   }]