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Combines gene expression data and biological pathway networks within the Mango 3D network environment

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Mango Workshop Files

Example data to combine microarray expression with kegg pathways and then further explore the network

  • eco_expr.tsv: example microarray expression data from E coli, collected by Hyejin Cho, and Hui-Hsien Chou
  • eco_merged9.txt: 9 E coli pathways from KEGG
  • gel.txt: Open this file in Mango and run line by line
  • split_nodes_links.pl: Perl script to split exported graph tsv files into node and link list

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Combines gene expression data and biological pathway networks within the Mango 3D network environment

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