first code migration iteration

jMotif · Feb 23, 2015 · 83eee75 · 83eee75
1 parent c199125
commit 83eee75
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diff --git a/.classpath b/.classpath
@@ -2,5 +2,11 @@
 <classpath>
 	<classpathentry kind="src" path="src"/>
 	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER/org.eclipse.jdt.internal.debug.ui.launcher.StandardVMType/JavaSE-1.7"/>
+	<classpathentry kind="lib" path="lib/time/joda-time-2.1.jar"/>
+	<classpathentry kind="lib" path="lib/logger/logback-classic-1.1.2.jar"/>
+	<classpathentry kind="lib" path="lib/logger/logback-core-1.1.2.jar"/>
+	<classpathentry kind="lib" path="lib/logger/slf4j-api-1.7.7.jar"/>
+	<classpathentry kind="lib" path="lib/junit/junit-4.10.jar"/>
+	<classpathentry kind="lib" path="lib/commons/commons-lang3-3.1.jar"/>
 	<classpathentry kind="output" path="bin"/>
 </classpath>
diff --git a/lib/checkstyle/configuration_1_0.dtd b/lib/checkstyle/configuration_1_0.dtd
@@ -0,0 +1,37 @@
+<?xml version="1.0" encoding="UTF-8"?>
+
+<!-- Add the following to any file that is to be validated against this DTD:
+
+<!DOCTYPE module PUBLIC
+    "-//Puppy Crawl//DTD Check Configuration 1.1//EN"
+    "http://www.puppycrawl.com/dtds/configuration_1_1.dtd">
+-->
+
+<!ELEMENT module (module|property|metadata)*>
+<!ATTLIST module name NMTOKEN #REQUIRED>
+
+<!ELEMENT property EMPTY>
+<!ATTLIST property
+	name NMTOKEN #REQUIRED
+	value CDATA #REQUIRED
+>
+
+<!--
+
+   Used to sort metadata in the Checkstyle configuration file. This
+   information is ignored by Checkstyle. This may be useful if you want to
+   store plug-in specific information.
+
+   To avoid name clashes between different tools/plug-ins you are *strongly*
+   encouraged to prefix all names with your domain name. For example, use the
+   name "com.mycompany.parameter" instead of "parameter".
+
+   The prefix "com.puppycrawl." is reserved for Checkstyle.
+
+-->
+
+<!ELEMENT metadata EMPTY>
+<!ATTLIST metadata
+	name NMTOKEN #REQUIRED
+	value CDATA #REQUIRED
+>
diff --git a/lib/checkstyle/hackystat.checkstyle.xml b/lib/checkstyle/hackystat.checkstyle.xml
@@ -0,0 +1,87 @@
+<?xml version="1.0" encoding="UTF-8"?>
+<!DOCTYPE module PUBLIC "-//Puppy Crawl//DTD Check Configuration 1.1//EN" "http://www.puppycrawl.com/dtds/configuration_1_1.dtd">
+
+<!-- For info on these checks, see http://checkstyle.sourceforge.net/config.html -->
+<!-- Uppercase comments indicate the 'section' in the checkstyle documentation. -->
+
+<module name="Checker">
+  <property name="charset" value="UTF-8" />
+  <property name="localeCountry" value="US" />
+  <property name="localeLanguage" value="en" />
+  <module name="FileTabCharacter" />
+
+
+  <module name="JavadocPackage">
+    <property name="allowLegacy" value="true" />
+  </module>
+
+  <module name="TreeWalker">
+    <!-- JAVADOC COMMENTS -->
+    <module name="JavadocType">
+      <property name="authorFormat" value="\S" />
+    </module>
+
+    <!-- Suppress violations when can't find ServletException class etc. -->
+    <module name="JavadocMethod">
+      <property name="allowUndeclaredRTE" value="true" />
+    </module>
+
+    <module name="JavadocVariable">
+      <property name="scope" value="public" />
+    </module>
+
+    <module name="JavadocStyle" />
+
+    <!-- IMPORTS -->
+    <module name="AvoidStarImport" />
+    <module name="RedundantImport" />
+    <module name="UnusedImports" />
+
+    <!-- NAMING CONVENTIONS -->
+    <module name="ConstantName">
+      <property name="format" value="^[a-zA-Z0-9]*(_[a-zA-Z0-9]+)*$" />
+    </module>
+    <module name="MethodName" />
+    <module name="ParameterName" />
+    <module name="TypeName" />
+
+    <!-- SIZE VIOLATIONS -->
+    <module name="LineLength">
+      <property name="max" value="100" />
+    </module>
+
+    <!-- WHITESPACE -->
+    <module name="WhitespaceAround">
+      <!-- Don't require whitespace around generic tokens like '<', '>', and '?' -->
+      <property name="tokens"
+        value="ASSIGN, BAND, BAND_ASSIGN, BOR, BOR_ASSIGN, BAND_ASSIGN,
+                                     BOR,BOR_ASSIGN, BSR, BSR_ASSIGN, BXOR, BXOR_ASSIGN, COLON,
+                                     DIV, DIV_ASSIGN, EQUAL, GE, GT, LAND, LCURLY, LE, LITERAL_ASSERT,
+                                     LITERAL_CATCH, LITERAL_DO, LITERAL_ELSE, LITERAL_FINALLY,
+                                     LITERAL_FOR, LITERAL_IF, LITERAL_RETURN, LITERAL_SYNCHRONIZED,
+                                     LITERAL_TRY, LITERAL_WHILE, LOR, LT, MINUS, MINUS_ASSIGN,
+                                     MOD, MOD_ASSIGN, NOT_EQUAL, PLUS, PLUS_ASSIGN, QUESTION,
+                                     RCURLY, SL, SLIST, SL_ASSIGN, SR, SR_ASSIGN, STAR, STAR_ASSIGN" />
+    </module>
+
+
+    <!-- MODIFIERS -->
+    <module name="ModifierOrder" />
+
+    <!-- BLOCK CHECKS -->
+    <module name="EmptyBlock">
+      <property name="option" value="text" />
+    </module>
+
+    <!-- CODING -->
+    <module name="EqualsHashCode" />
+    <module name="LeftCurly" />
+    <module name="NeedBraces" />
+    <module name="RightCurly">
+      <property name="option" value="alone" />
+    </module>
+    <module name="AvoidNestedBlocks" />
+    <module name="SimplifyBooleanExpression" />
+    <module name="SimplifyBooleanReturn" />
+  </module>
+</module>
diff --git a/lib/commons/commons-lang3-3.1.jar b/lib/commons/commons-lang3-3.1.jar
diff --git a/lib/emma/hackystat.emma.xsl b/lib/emma/hackystat.emma.xsl
@@ -0,0 +1,18 @@
+<?xml version="1.0"?>
+<xsl:stylesheet version="1.0" xmlns:xsl="http://www.w3.org/1999/XSL/Transform">
+<xsl:output method="text" indent="yes"/>
+
+<xsl:template match="/">
+  <xmldata>
+    <xsl:apply-templates select="report/data/all/coverage"/>  
+  </xmldata>
+</xsl:template>
+
+<xsl:template match="coverage">
+  <xsl:value-of select="@type"/> 
+  <xsl:text>  </xsl:text>  
+  <xsl:value-of select="@value"/> 
+  <xsl:text>&#10;</xsl:text>
+</xsl:template>
+
+</xsl:stylesheet>
diff --git a/lib/findbugs/hackystat.findbugs.exclude.xml b/lib/findbugs/hackystat.findbugs.exclude.xml
@@ -0,0 +1,36 @@
+<FindBugsFilter>
+  <Match>
+    <Class name="~.*\.Test.*" />
+  </Match>
+  <Match>
+    <!-- <Bug category="DLS_DEAD_LOCAL_STORE" /> -->
+    <Bug code="DLS" />
+  </Match>
+  <Match>
+    <!-- <Bug category="NP_ALWAYS_NULL" /> -->
+    <Bug code="NP" />
+  </Match>
+  <Match>
+    <!-- <Bug category="EI_EXPOSE_REP" /> -->
+    <Class name="edu.hawaii.jmotif.sax.alphabet.NormalAlphabet" />
+    <Bug code="EI" />
+  </Match>
+  <Match>
+    <!-- <Bug category="EI_EXPOSE_REP" /> -->
+    <Class name="edu.hawaii.jmotif.gi.repair.RePairRule" />
+    <Method name="getRules" />
+    <Bug code="EI" />
+  </Match>
+  <Match>
+    <!-- <Bug category="EI_EXPOSE_REP" /> -->
+    <Class name="edu.hawaii.jmotif.sax.datastructures.MotifRecord" />
+    <Method name="getPayload" />
+    <Bug code="EI" />
+  </Match>
+  <Match>
+    <!-- <Bug category="EI_EXPOSE_REP" /> -->
+    <Class name="edu.hawaii.jmotif.sax.datastructures.SaxRecord" />
+    <Method name="getPayload" />
+    <Bug code="EI" />
+  </Match>
+</FindBugsFilter>