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Updated for JADE2
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andygittings committed Nov 8, 2021
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12 changes: 6 additions & 6 deletions jade/modules.rst
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Expand Up @@ -25,24 +25,24 @@ The utility displays the available modules by issuing the command::

or displays only the information related to a certain software package, *e.g.*::

module avail pgi
module avail gromacs

The avail instruction displays all the versions available for the installed applications, and shows which version is pre-defined as being the default. A software package is loaded with the load or the add instructions, *e.g.*::

module load pgi
module load gromacs

If no version is specified, the default version of the software is loaded. Specific versions, other than the default can be loaded by specifying the version, *e.g.*::

module load pgi/2017
module load gromacs/2020.3

The modules that are already loaded by users in a session are displayed with the command::

module list

A module can be "unloaded" with the unload or rm instructions, *e.g.*::

module unload pgi
module load pgi/2017
module unload gromacs
module load gromacs/2020.3

Lastly, all modules loaded in a session can be "unloaded" with a single command:::

Expand All @@ -55,4 +55,4 @@ Best practices
``module`` can be used to modify the environment after login, *e.g.* to load the Portland compilers in order to build an application. However, most frequent usage will be to load an already built application, and the best way to do this is from within the submission script. For example, assuming a job uses the NAMD molecular dynamics package, the submission script contains::

module purge
module load NAMD
module load namd

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