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Removed the /usr/local/cuda directory from the requirements as we're …
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…not mounting the cluster's CUDA over images anymore due to version incompatibilities. Images should have their own version of CUDA that each builds to.

Remove the /home_directory requirement as Singularity automatically mounts home in the same location as outside of the container.
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twinkarma committed Jan 12, 2018
1 parent 630b99d commit 3081ffe
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6 changes: 3 additions & 3 deletions jade/containers.rst
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Expand Up @@ -109,13 +109,13 @@ Singularity 2.4 is installed in ``/jmain01/apps/singularity/2.4``. When you buil

::

/usr/local/cuda
/tmp
/local_scratch
/home_directory


These will be mounted by the local node when your container executes. The ``/tmp`` & ``/local_scratch`` directory are the local RAID disks on the DGX node and should be used for building code or temporary files. Your home directory will also be mounted into the container as ``/home_directory``.
These will be mounted by the local node when your container executes. The ``/tmp`` & ``/local_scratch`` directory are the local RAID disks on the DGX node and should be used for building code or temporary files.

Unlike Docker containers, the home directory the same as when you're outside the container (e.g. ``/jmain01/home/your_project/your_group/your_username``). You can use ``cd ~`` to get to your home directory and you can use ``echo $HOME`` to print out your home location.

There are 2 scripts in the ``/jmain01/apps/singularity/2.4/bin`` directory that you can use to launch your container using Slurm:

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