CURRENTLY WORK IN PROGRESS! For now, use BinBencherBackend.jl.
BinBencher is a command-line interface (CLI) tool to evaluate metagenomic binnings given a ground-truth reference. It is the CLI version of the Julia package BinBencherBackend.jl. For more customised, flexible analysis of binnings, using the backend directly in e.g. an interactive notebook backend may preferred.
- Download and install Julia
- In the Julia REPL, type
]to enter package mode - Type
add https://github.com/jakobnissen/BinBencher.jl - Type
build - You should now have an executable in
~/.julia/bin
WIP: SUBJECT TO CHANGE
WIP: SUBJECT TO CHANGE