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Convert rules for wrapped tools to official wrapper #117

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fmaguire opened this issue May 19, 2021 · 0 comments
Open

Convert rules for wrapped tools to official wrapper #117

fmaguire opened this issue May 19, 2021 · 0 comments
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SIGNAL v2

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@fmaguire
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Snakemake has wrappers that modularize and let us remove some of the messier bits of parsing around certain tools.

For simple rules we should just use them and it saves us maintaining envs and scripts etc.

https://snakemake.readthedocs.io/en/stable/snakefiles/modularization.html#wrappers
@fmaguire fmaguire added this to To do in SIGNAL v2 via automation May 19, 2021
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