Bayesian Epiallele Detection (BED)
To install this R package use the devtools install_github command:
library(devtools)
install_github("james-e-barrett/bed")
Use the help function to find an example of how to use use the model:
?bed_fit
This code is described in the draft manuscript "Quantification of tumour evolution and heterogeneity via Bayesian epiallele detection" available at https://arxiv.org/abs/1702.00633.