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$snapshot failure with value set #1846

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seanmcilvenna opened this issue May 13, 2020 · 0 comments
Open

$snapshot failure with value set #1846

seanmcilvenna opened this issue May 13, 2020 · 0 comments

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@seanmcilvenna
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seanmcilvenna commented May 13, 2020 •
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Describe the bug
When generating a snapshot for a StructureDefinition loaded in HAPI, I get the following error:

2020-05-13 17:04:59.414 [http-nio-8080-exec-8717] INFO  fhirtest.access [LoggingInterceptor.java:175] Path[/fhir] Source[66.232.121.171] Operation[update  Bundle/Med-2-Dental-referral-bundle] UA[PostmanRuntime/7.24.1] Params[] ResponseEncoding[XML]
2020-05-13 17:05:06.039 [http-nio-8080-exec-8695] ERROR c.u.f.r.s.i.ExceptionHandlingInterceptor [ExceptionHandlingInterceptor.java:140] Failure during REST processing
ca.uhn.fhir.rest.server.exceptions.InternalErrorException: Failed to call access method: java.lang.UnsupportedOperationException
        at ca.uhn.fhir.rest.server.method.BaseMethodBinding.invokeServerMethod(BaseMethodBinding.java:244)
        at ca.uhn.fhir.rest.server.method.OperationMethodBinding.invokeServer(OperationMethodBinding.java:329)
        at ca.uhn.fhir.rest.server.method.BaseResourceReturningMethodBinding.doInvokeServer(BaseResourceReturningMethodBinding.java:247)
        at ca.uhn.fhir.rest.server.method.BaseResourceReturningMethodBinding.invokeServer(BaseResourceReturningMethodBinding.java:384)
        at ca.uhn.fhir.rest.server.method.OperationMethodBinding.invokeServer(OperationMethodBinding.java:304)
        at ca.uhn.fhir.rest.server.RestfulServer.handleRequest(RestfulServer.java:991)
        at ca.uhn.fhir.rest.server.RestfulServer.doGet(RestfulServer.java:336)
        at ca.uhn.fhir.rest.server.RestfulServer.service(RestfulServer.java:1675)
        at javax.servlet.http.HttpServlet.service(HttpServlet.java:741)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:231)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
        at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:53)
        at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:193)
        at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:166)
        at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:200)
        at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:96)
        at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:490)
        at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:139)
        at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:92)
        at org.apache.catalina.valves.AbstractAccessLogValve.invoke(AbstractAccessLogValve.java:678)
        at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
        at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:343)
        at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:408)
        at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:66)
        at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:836)
        at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1839)
        at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:49)
        at java.base/java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1128)
        at java.base/java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:628)
        at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
        at java.base/java.lang.Thread.run(Thread.java:834)
Caused by: java.lang.reflect.InvocationTargetException: null
        at jdk.internal.reflect.GeneratedMethodAccessor306.invoke(Unknown Source)
        at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.base/java.lang.reflect.Method.invoke(Method.java:566)
        at ca.uhn.fhir.rest.server.method.BaseMethodBinding.invokeServerMethod(BaseMethodBinding.java:239)
        ... 30 common frames omitted
Caused by: java.lang.UnsupportedOperationException: null
        at org.hl7.fhir.r4.hapi.ctx.HapiWorkerContext.expandVS(HapiWorkerContext.java:280)
        at org.hl7.fhir.r4.conformance.ProfileUtilities.updateFromDefinition(ProfileUtilities.java:1877)
        at org.hl7.fhir.r4.conformance.ProfileUtilities.processPaths(ProfileUtilities.java:698)
        at org.hl7.fhir.r4.conformance.ProfileUtilities.generateSnapshot(ProfileUtilities.java:454)
        at org.hl7.fhir.r4.hapi.validation.SnapshotGeneratingValidationSupport.generateSnapshot(SnapshotGeneratingValidationSupport.java:89)
        at org.hl7.fhir.r4.hapi.validation.ValidationSupportChain.generateSnapshot(ValidationSupportChain.java:147)
        at org.hl7.fhir.r4.hapi.validation.CachingValidationSupport.generateSnapshot(CachingValidationSupport.java:83)
        at ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoStructureDefinitionR4.generateSnapshot(FhirResourceDaoStructureDefinitionR4.java:37)
        at ca.uhn.fhir.jpa.dao.r4.FhirResourceDaoStructureDefinitionR4.generateSnapshot(FhirResourceDaoStructureDefinitionR4.java:30)
        at jdk.internal.reflect.GeneratedMethodAccessor307.invoke(Unknown Source)
        at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
        at java.base/java.lang.reflect.Method.invoke(Method.java:566)
        at org.springframework.aop.support.AopUtils.invokeJoinpointUsingReflection(AopUtils.java:344)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.invokeJoinpoint(ReflectiveMethodInvocation.java:198)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:163)
        at org.springframework.dao.support.PersistenceExceptionTranslationInterceptor.invoke(PersistenceExceptionTranslationInterceptor.java:139)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
        at org.springframework.transaction.interceptor.TransactionAspectSupport.invokeWithinTransaction(TransactionAspectSupport.java:366)
        at org.springframework.transaction.interceptor.TransactionInterceptor.invoke(TransactionInterceptor.java:99)
        at org.springframework.aop.framework.ReflectiveMethodInvocation.proceed(ReflectiveMethodInvocation.java:186)
        at org.springframework.aop.framework.JdkDynamicAopProxy.invoke(JdkDynamicAopProxy.java:212)
        at com.sun.proxy.$Proxy201.generateSnapshot(Unknown Source)
        at ca.uhn.fhir.jpa.provider.r4.BaseJpaResourceProviderStructureDefinitionR4.snapshot(BaseJpaResourceProviderStructureDefinitionR4.java:73)
        ... 34 common frames omitted

To Reproduce

  1. Load the attached structure definition us-core-observation-lab.zip
  2. Execute $snapshot on it

Expected behavior
The snapshot should generate and return in the response to the request.

Environment (please complete the following information):

  • HAPI FHIR Version 4.2
  • OS: Linux Server
  • Browser Chrome/Postman
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