- First CRAN release.
- Don't divide by 0 when normalizing if already 0; PER is now normalized with OCR and ECAR.
- Warn if data are not normalized by checking that the "Background" group's OCR, ECAR, and PER values are 0.
- Add assay type as argument to plot ECAR/OCR meaningfully as all assay types were previously being summarized instead of just one.
-
Add
normalize()
, a cell count/protein mass normalization function.read_data
now can take a csv file with cell counts or protein mass ($\mu$g) for each of the experimental groups to normalize the data. An example csv is provided below for a dataset with 4 experimental groups:exp_group measure Group_1 30000 Group_2 30000 Group_3 5000 Group_4 5000
- Add delimiter between group and assay labels as argument in
read_data()
to support delimiters other than .
- Fix the calculation of coupled mitochondrial respiration (#4). This correction was published in https://doi.org/10.1074/jbc.AAC118.004855.
First release before initial submission for publication.