-
Notifications
You must be signed in to change notification settings - Fork 1
/
Input_gen(Py2).py
343 lines (299 loc) · 11.2 KB
/
Input_gen(Py2).py
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
# Title: GUI for deMon2k Input Generation (Python 2.7.6)
# Date Created: Aug 8th,2016
# Date Last Modified: Aug 11th, 2016
# Version: 1.0
#
# Author: Jonathan Kung
# D.R. Salahub, M.C. Silva
# University of Calgary
# Purpose: Create a simple GUI to allow users to easily make a demon2k input
# without worrying about formatting or forgetting settings
### Import Libraries ###
from Tkinter import *
import ttk
### Tk Widget as functions ###
# local = Which window the widget is on
# text_lbl = The text displayed on the widget
# nwidth = the width of the widget
# comms = the command associated with the widget when activated
# txtvar = The variable associated with the input of text
# var = variable associated with the on/off state of the widget
# val = the list of values used in the combobox
def Labels(local,text_lbl,nwidth=10):
label = ttk.Label(local, text=text_lbl, width=nwidth, anchor="center")
return label
def Buttons(local,text_lbl,comms,nwidth=10):
button = ttk.Button(local, text=text_lbl, width=nwidth,command=comms)
return button
def Entrys(local,txtvar,nwidth=10):
entry = ttk.Entry(local,width=nwidth, textvariable=txtvar)
return entry
def RadioButtons(local,text_lbl,var,val):
radio = ttk.Radiobutton(local, text=text_lbl, variable=var, value=val)
return radio
def Comboboxs(local,val,nwidth=10):
combobox = ttk.Combobox(local, values=val, width=nwidth)
return combobox
def CheckButtons(local,text_lbl,var):
checkbuttons = ttk.Checkbutton(local, text=text_lbl, variable=var)
return checkbuttons
### Combobox command ###
# This will allow the custom entries into comboboxes
def updatevalue(evt):
widget = evt.widget
txt = widget.get()
vals = widget.cget('values')
if not vals:
widget.configure(values = (txt, ))
elif txt not in vals:
widget.configure(values =vals + (txt, ))
return 'break'
### Defining the main window ###
def main_window(frame):
### Get all the variables from all the widgets ###
def getvars(*args):
_finp = Entry1.get()
_title = Entry2.get()
_vxctyp = vxctyp_var.get()
_xcfunc = Combobox1.get()
_basis = Combobox2.get()
_auxis = Combobox3.get()
_ecp = Combobox4.get()
_shelltyp = Combobox5.get()
_scfmxiter = Entry3.get()
_tol = Entry4.get()
_guess = Combobox6.get()
_calctyp = calc_var.get()
_freq = freq_var.get()
_geom = Entry5.get()
_thermo = thermo_var.get()
_mult = Entry6.get()
_charge = Entry7.get()
#_tight = tight_var.get()
_shift = Entry8.get()
_grid = Combobox7.get()
_diis = diis_var.get()
_optgeom = Combobox8.get()
_geomdis = geomdis_var.get()
_geomtyp = geomtyp_var.get()
### Take the variables and print the deMon2k input into output file ###
def makeinp(*args):
output = open(_finp, 'w')
output.write("TITLE"+" "+_title+"\n")
output.write("VXCTYP"+" "+_vxctyp+" "+_xcfunc+"\n")
output.write("BASIS ("+_basis+")"+"\n")
if _ecp != "NONE":
output.write("ECPS ("+_ecp+")"+"\n")
output.write("AUXIS ("+_auxis+")"+"\n")
_tight = tight_var.get()
if _tight == 1:
output.write("SCFTYP"+" "+_shelltyp+" "+"MAX="+_scfmxiter+" "+"TOL="+_tol+"\n")
elif _tight == 0:
_tight = "NOTIGHTEN"
output.write("SCFTYP"+" "+_tight+" "+_shelltyp+" "+"MAX="+_scfmxiter+" "+"TOL="+_tol+"\n")
else:
print("Invalid Tight setting")
if _shift != "0":
output.write("SHIFT"+" "+_shift+"\n")
if (_grid == "medium" or _grid == "coarse" or _grid == "fine"):
output.write("GRID FIXED"+" "+_grid+"\n")
output.write("GUESS"+" "+_guess+"\n")
if _diis == 0:
output.write("DIIS OFF")
output.write("MULTIPLICITY"+" "+_mult+"\n")
output.write("CHARGE"+" "+_charge+"\n")
if _calctyp == "OPT":
output.write("OPTIMIZATION"+" "+_optgeom+"\n")
if _freq == 1:
output.write("FREQUENCY"+"\n")
if _thermo == 1:
output.write("THERMO"+"\n")
output.write("GEOMETRY"+" "+_geomtyp+" "+_geomdis+"\n")
### Open Geometry file ###
geomfile= open(_geom,'r')
### Read and copy file up to 101 lines ###
for x in range(0,100):
try:
_xyz=geomfile.readline()
output.write(_xyz)
except EOFError:
pass
geomfile.close()
output.close()
### end of getvars
makeinp()
#### Each individual widget on the main screen ####
### FILE NAME ###
Label1 = Labels(frame,"File name:")
Label1.grid(column=1,row=1)
file_name_var = StringVar()
Entry1 = Entrys(frame,file_name_var,30)
Entry1.grid(column=2,row=1,columnspan=2)
### TITLE ###
Label2 = Labels(frame, "Title:")
Label2.grid(column=4,row=1)
title_var = StringVar()
Entry2 = Entrys(frame,title_var,30)
Entry2.grid(column=5,row=1,columnspan=2)
### VXCTYP ###
Label3 = Labels(frame,"VXCTYP")
Label3.grid(column=1,row=2)
vxctyp_var = StringVar()
Radio1 = RadioButtons(frame,"Auxis",vxctyp_var,"AUXIS")
Radio2 = RadioButtons(frame,"Basis",vxctyp_var,"BASIS")
Radio1.grid(column=3,row=2)
Radio2.grid(column=2,row=2)
### XC Functional ###
Label4 = Labels(frame,"XC Functional:",12)
Label4.grid(column=5,row=2)
functional_list =('B3LYP', 'BLYP', 'PBE', 'PBE0', 'PW91')
Combobox1 = Comboboxs(frame,functional_list)
Combobox1.bind('<Return>', updatevalue)
Combobox1.grid(column=6,row=2)
### BASIS SET ###
Label5 = Labels(frame, "Basis set:")
Label5.grid(column=1,row=5)
basis_set_list=('DZVP','DZVP-GGA','TZVP','TZVP-GGA')
Combobox2 = Comboboxs(frame,basis_set_list)
Combobox2.bind('<Return>', updatevalue)
Combobox2.grid(column=2,row=5)
### AUXIS SET ###
Label6 = Labels(frame, "Auxis set:")
Label6.grid(column=3,row=5)
auxis_set_list=('gen-a1','gen-a2','gen-a2**','gen-a3**')
Combobox3 = Comboboxs(frame,auxis_set_list)
Combobox3.bind('<Return>', updatevalue)
Combobox3.grid(column=4,row=5)
### ECP ###
Label7 = Labels(frame, "ECP:")
Label7.grid(column=5,row=5)
ecp_list=('NONE','ECP|SD','RECP|SD','QECP|SD')
Combobox4 = Comboboxs(frame,ecp_list)
Combobox4.bind('<Return>', updatevalue)
Combobox4.grid(column=6,row=5)
### KS Shell Type ###
Label8 = Labels(frame, "KS type:")
Label8.grid(column=1,row=6)
shelltyp_list=('RKS','ROKS','UKS')
Combobox5 = Comboboxs(frame,shelltyp_list)
Combobox5.bind('<Return>', updatevalue)
Combobox5.grid(column=2,row=6)
### SCF MAX ITER ###
Label9 = Labels(frame, "Max Iter for SCF:",12)
Label9.grid(column=3,row=6)
scfmaxiter_var = StringVar()
Entry3 = Entrys(frame,scfmaxiter_var)
Entry3.grid(column=4,row=6)
### TOL ###
Label10 = Labels(frame, "Tolerance:")
Label10.grid(column=1,row=7)
tol_var = StringVar()
Entry4 = Entrys(frame,tol_var)
Entry4.grid(column=2,row=7)
### GUESS ###
Label11 = Labels(frame, "Guess:")
Label11.grid(column=5,row=6)
guess_list=('TB','CORE','Fermi')
Combobox6 = Comboboxs(frame,guess_list)
Combobox6.bind('<Return>', updatevalue)
Combobox6.grid(column=6,row=6)
### CALCTYP ###
Label12 = Labels(frame, "Calculation:")
Label12.grid(column=1,row=10)
calc_var = StringVar()
Radio3 = RadioButtons(frame,"Single Point Energy",calc_var, "SPE")
Radio4 = RadioButtons(frame,"Optimization",calc_var, "OPT")
Radio3.grid(column=2,row=10)
Radio4.grid(column=3,row=10)
### FREQUENCY ###
freq_var = IntVar()
check1 = CheckButtons(frame, "Frequency Analysis", freq_var)
check1.grid(column=4,row=10)
### GEOMETRY ###
Label13 = Labels(frame, "Input Geometry file name:",30)
Label13.grid(column=1,row=12,columnspan=2)
geometry_var = StringVar()
Entry5 = Entrys(frame, geometry_var,20)
Entry5.grid(column=3,row=12,columnspan=2)
### THERMO ###
thermo_var = StringVar()
check2 = CheckButtons(frame, "Thermo Calc.", thermo_var)
check2.grid(column=5,row=10)
### MULTIPLICITY ###
Label14 = Labels(frame, "Multiplicity:")
Label14.grid(column=3,row=7)
multiplicity_var = StringVar()
Entry6 = Entrys(frame, multiplicity_var)
Entry6.grid(column=4,row=7)
### CHARGE ###
Label15 = Labels(frame, "Charge:")
Label15.grid(column=5,row=7)
charge_var = StringVar()
Entry7 = Entrys(frame, charge_var)
Entry7.grid(column=6,row=7)
### TIGHT ###
tight_var = IntVar()
check3 = CheckButtons(frame, "Tighten", tight_var)
check3.grid(column=5,row=8)
### SHIFT ###
Label16 = Labels(frame, "Shift:")
Label16.grid(column=1,row=8)
shift_var = StringVar()
Entry8 = Entrys(frame, shift_var)
Entry8.grid(column=2,row=8)
### GRID ###
Label17 = Labels(frame, "Grid:")
Label17.grid(column=3,row=8)
grid_list =('do not fix','MEDIUM','COARSE','FINE')
Combobox7 = Comboboxs(frame,grid_list)
Combobox7.bind('<Return>', updatevalue)
Combobox7.grid(column=4,row=8)
### DIIS ###
diis_var = StringVar()
check4 = CheckButtons(frame, "DIIS", diis_var)
check4.grid(column=6,row=8)
### OPTGEOM ###
Label18 = Labels(frame, "Geometry for OPT:",14)
Label18.grid(column=5,row=12)
optgeom_list=('REDUNDANT','CARTESIAN','INTERNAL')
Combobox8 = Comboboxs(frame, optgeom_list,15)
Combobox8.bind('<Return>', updatevalue)
Combobox8.grid(column=6,row=12)
### GEOMDIS ###
Label19 = Labels(frame, "Geometry Coordinates:",18)
Label19.grid(column=1,row=13)
geomdis_var = StringVar()
Radio5 = RadioButtons(frame, "Angstrom", geomdis_var, "ANGSTROM")
Radio6 = RadioButtons(frame, "Bohr", geomdis_var, "BOHR")
Radio5.grid(column=3,row=13)
Radio6.grid(column=2,row=13)
### GEOMTYP ###
Label20 = Labels(frame, "Geometry Type:",12)
Label20.grid(column=4,row=13)
geomtyp_var = StringVar()
Radio7 = RadioButtons(frame,"Cartesian",geomtyp_var,"CARTESIAN")
Radio8 = RadioButtons(frame,"Z-Matrix",geomtyp_var,"ZMATRIX")
Radio7.grid(column=5,row=13)
Radio8.grid(column=6,row=13)
### CREATE/Exit ###
Button1 = Buttons(frame,"Create Input",getvars)
Button1.grid(column=3,row=20)
Button2 = Buttons(frame,"Exit",frame.destroy)
Button2.grid(column=4,row=20)
### Separators ###
s1 = ttk.Separator(frame, orient=HORIZONTAL)
s1.grid(row=14,columnspan=7, stick="ew",pady=2)
s2 = ttk.Separator(frame, orient=HORIZONTAL)
s2.grid(row=11,columnspan=7, stick="ew",pady=2)
s3 = ttk.Separator(frame, orient=HORIZONTAL)
s3.grid(row=9,columnspan=7, stick="ew",pady=2)
### Initialize window ###
def main():
root = Tk()
frame = ttk.Frame(root)
root.title('deMon2k Input Generator')
app1 = main_window(root)
root.mainloop()
### Start program ###
if __name__ == '__main__':
main()