Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

fetch_process_wbm_dataset.py: data/wbm/2022-10-19-wbm-init-structs.json.bz2 does not exist #28

Closed
pbenner opened this issue May 6, 2023 · 0 comments · Fixed by #29
Closed

fetch_process_wbm_dataset.py: data/wbm/2022-10-19-wbm-init-structs.json.bz2 does not exist #28

pbenner opened this issue May 6, 2023 · 0 comments · Fixed by #29
Labels
bug Something isn't working data Data loading and processing

Comments

@pbenner
Copy link
Collaborator

pbenner commented May 6, 2023

Thanks for all the bugfixes! The latest error with a fresh start is the following:

Traceback (most recent call last):
  File "/home/pbenner/Source/tmp/matbench-discovery/data/wbm/fetch_process_wbm_dataset.py", line 597, in <module>
    df_init_struct = pd.read_json(
  File "/home/pbenner/.local/opt/anaconda3/envs/crysfeat/lib/python3.10/site-packages/pandas/io/json/_json.py", line 760, in read_json
    json_reader = JsonReader(
  File "/home/pbenner/.local/opt/anaconda3/envs/crysfeat/lib/python3.10/site-packages/pandas/io/json/_json.py", line 861, in __init__
    data = self._get_data_from_filepath(filepath_or_buffer)
  File "/home/pbenner/.local/opt/anaconda3/envs/crysfeat/lib/python3.10/site-packages/pandas/io/json/_json.py", line 917, in _get_data_from_filepath
    raise FileNotFoundError(f"File {filepath_or_buffer} does not exist")
FileNotFoundError: File /home/pbenner/Source/tmp/matbench-discovery/data/wbm/2022-10-19-wbm-init-structs.json.bz2 does not exist
@janosh janosh added bug Something isn't working data Data loading and processing labels May 6, 2023
janosh added a commit that referenced this issue May 6, 2023
@janosh
fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial st…
53b849a 
…ructures from disk (fixes #28)
@janosh janosh mentioned this issue May 6, 2023
Merged
@janosh janosh closed this as completed in #29 May 6, 2023
janosh added a commit that referenced this issue May 6, 2023
@janosh
Fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial …
5104506 
…structures from disk (#29)

* add chgnet to running-models deps

* pre-commit autoupdate

* ruff select PIE,PT

* fix ruff PT errors

* fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial structures from disk (fixes #28)
janosh added a commit that referenced this issue Jun 20, 2023
@janosh
Fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial …
d7d6bca 
…structures from disk (#29)

* add chgnet to running-models deps

* pre-commit autoupdate

* ruff select PIE,PT

* fix ruff PT errors

* fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial structures from disk (fixes #28)
janosh added a commit that referenced this issue Jun 20, 2023
@janosh
Fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial …
48a5d28 
…structures from disk (#29)

* add chgnet to running-models deps

* pre-commit autoupdate

* ruff select PIE,PT

* fix ruff PT errors

* fix fetch_process_wbm_dataset.py unnecessarily loading WBM initial structures from disk (fixes #28)
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Assignees
No one assigned
Labels
bug Something isn't working data Data loading and processing
Projects
None yet
Milestone
No milestone
2 participants
@pbenner @janosh