Update vcf_four_gamete.py

Fixing off by 1 issue in region extension
jaredgk · Jan 22, 2021 · 4232831 · 4232831
1 parent a4f1ebb
commit 4232831
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/pgpipe/vcf_four_gamete.py b/pgpipe/vcf_four_gamete.py
@@ -348,7 +348,7 @@ def compatibleintervals(self):
                 if not self.extend_noninf:
                     tempcint[0] = self.poslist[cints[ci][0]-1]
                     if ci == len(cints)-1:
-                        tempcint[1] = self.poslist[self.informpolysites[-1]]-1
+                        tempcint[1] = self.poslist[self.informpolysites[-1]-1]-1
                     else:
                         tempcint[1] = self.poslist[self.informpolysites[self.informpolysites.index(cints[ci][1])+1]-1]-1
                 else: