Updated window text

jaredgk · Jan 28, 2021 · da655b0 · da655b0
1 parent b350c40
commit da655b0
Showing 1 changed file with 9 additions and 3 deletions.
diff --git a/pgpipe/bed_utilities.py b/pgpipe/bed_utilities.py
@@ -23,8 +23,8 @@
     Windows Utility
     ***************
 
-    Given a chromosome size file, the windows utility will generate a BED file of 
-    interval features.
+    Given a chromosome size file and a window size, the windows utility will generate a 
+    BED file of interval features.
 
     =============
     Example usage
@@ -219,6 +219,12 @@
         files (merge); create a BED file of complementary features - i.e. features that 
         do not overlap - from a BED file (complement).
 
+    *************************************
+    Window Utility Command-line Arguments
+    *************************************
+    **--window-size** *<window_size_int>*
+        Argument used to define the window/interval size to return.
+
     *************************************
     Sample Utility Command-line Arguments
     *************************************
@@ -269,7 +275,7 @@
         Argument used to define the BED/VCF/VCF.gz file used to remove features that 
         do not intersect with the given file's features/variants.
         removing features/positions.
-        
+
     ************************************
     Merge Utility Command-line Arguments
     ************************************