zona-analysis

Direct visualization and characterization of the human zona incerta and surrounding structures

Preprint available at: https://www.biorxiv.org/content/10.1101/2020.03.25.008318v1

Data

Imaging Data available on OSF.io at: https://osf.io/c8p5n/

Scripts

Scripts for template creation, volumetric analysis, and point analysis in scripts/

Notebooks

Jupyter Notebooks for the associated manuscript in notebooks:

• 01_template_creation.ipynb -- Template Creation Validation using AFIDs http://dx.doi.org/10.1002/hbm.24693
• 02_voxel_overlap_segmentations.ipynb -- Voxel Overlap for Segmentations
• 03_regions_of_interest.ipynb -- Regions of Interest
• 03_regions_of_interest_MSTRCHT.ipynb -- Replication of ROI analysis in Maastricht dataset
• 04_psa_analysis.ipynb -- Point analysis in the posterior subthalamic area
• 05_voxel_overlap_individual_subjects.ipynb -- Voxel Overlap for Individual Subjects
• 05_voxel_overlap_individual_subjects_MSTRCHT.ipynb -- Replication in Maastricht dataset