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Keep small genomes for computing AA compositions of taxa in GTDB
R-CMD-check #60: Commit 82f20b4 pushed by jedick
July 10, 2024 02:42 3m 34s main
July 10, 2024 02:42 3m 34s
Use post-curation updated taxon names in GTDB 220
R-CMD-check #59: Commit 13589ee pushed by jedick
July 9, 2024 14:53 4m 6s main
July 9, 2024 14:53 4m 6s
Update default reference database to GTDB version 220
R-CMD-check #58: Commit 603e301 pushed by jedick
July 6, 2024 03:38 4m 35s main
July 6, 2024 03:38 4m 35s
Submit version 1.1.0 to CRAN
R-CMD-check #57: Commit 171a3af pushed by jedick
July 2, 2024 00:02 3m 29s main
July 2, 2024 00:02 3m 29s
Update links for RDP training files for GTDB r214
R-CMD-check #56: Commit 9550f22 pushed by jedick
June 25, 2024 05:55 3m 20s main
June 25, 2024 05:55 3m 20s
Add "Comparing more datasets" to plotting.Rmd
R-CMD-check #55: Commit 5d78de2 pushed by jedick
June 23, 2024 04:17 11m 44s main
June 23, 2024 04:17 11m 44s
Add 'taxon_AA' argument to map_taxa()
R-CMD-check #54: Commit c70f60c pushed by jedick
April 4, 2024 02:47 3m 57s main
April 4, 2024 02:47 3m 57s
Remove GTDB r207 reference database
R-CMD-check #53: Commit aeb4b6f pushed by jedick
April 4, 2024 02:25 3m 39s main
April 4, 2024 02:25 3m 39s
Add GTDB r214 reference database
R-CMD-check #52: Commit e77f3f1 pushed by jedick
April 2, 2024 09:16 3m 58s main
April 2, 2024 09:16 3m 58s
Use version numbers for reference databases
R-CMD-check #51: Commit 25fe4f5 pushed by jedick
April 2, 2024 06:58 3m 32s main
April 2, 2024 06:58 3m 32s
Correct calculation of protein length in get_metrics()
R-CMD-check #50: Commit d6def7c pushed by jedick
March 29, 2024 04:24 3m 29s main
March 29, 2024 04:24 3m 29s
'metrics' replaces 'x' and 'y' arguments in plot_ps_metrics2()
R-CMD-check #49: Commit 6567692 pushed by jedick
March 29, 2024 02:49 11m 34s main
March 29, 2024 02:49 11m 34s
Update for renamed functions in canprot
R-CMD-check #48: Commit 7448a06 pushed by jedick
March 16, 2024 05:08 4m 54s main
March 16, 2024 05:08 4m 54s
Move add_hull() to canprot::add.hull()
R-CMD-check #47: Commit 2fb35e8 pushed by jedick
March 10, 2024 10:20 4m 28s main
March 10, 2024 10:20 4m 28s
Adjust column names from output of calc.metrics()
R-CMD-check #46: Commit 53a692c pushed by jedick
March 5, 2024 07:56 3m 55s main
March 5, 2024 07:56 3m 55s
Make chemlab() wrap canprot::cplab
R-CMD-check #45: Commit d0e5c68 pushed by jedick
March 3, 2024 01:49 11m 22s main
March 3, 2024 01:49 11m 22s
Move calc_metrics() to canprot::calc.metrics()
R-CMD-check #44: Commit 9b6c97e pushed by jedick
March 2, 2024 05:29 9m 53s main
March 2, 2024 05:29 9m 53s
Add 'Domain' as an allowed rank in ps_taxacounts()
R-CMD-check #43: Commit 0d96c05 pushed by jedick
February 27, 2024 23:58 11m 48s main
February 27, 2024 23:58 11m 48s
Revise scripts for processing reference databases
R-CMD-check #42: Commit 059c5e9 pushed by jedick
January 4, 2024 06:42 3m 46s main
January 4, 2024 06:42 3m 46s
Normalize file names for RefSeq and GTDB
R-CMD-check #41: Commit 7c02402 pushed by jedick
December 29, 2023 12:42 11m 35s main
December 29, 2023 12:42 11m 35s
Update plotting.Rmd
R-CMD-check #40: Commit bea4bfc pushed by jedick
December 5, 2023 23:59 12m 12s main
December 5, 2023 23:59 12m 12s
Query cloud mirror for CRAN version badge
R-CMD-check #39: Commit 7204bf4 pushed by jedick
September 22, 2023 12:45 4m 46s main
September 22, 2023 12:45 4m 46s
Use CRAN version badge from shields.io
R-CMD-check #38: Commit 8ba8a65 pushed by jedick
September 22, 2023 12:27 4m 20s main
September 22, 2023 12:27 4m 20s
Update citation
R-CMD-check #37: Commit cffc6be pushed by jedick
September 17, 2023 21:58 4m 21s main
September 17, 2023 21:58 4m 21s
Resize image in README.md
R-CMD-check #36: Commit 6f5e480 pushed by jedick
September 17, 2023 01:33 4m 15s main
September 17, 2023 01:33 4m 15s