This repository contains the code used in Rozells and Gavornik 2023. The code is a modified version of that used by Cone and Shouval in their 2021 eLife paper "Learning precise spatiotemporal sequences via biophysically realistic learning rules in a modular, spiking network", https://elifesciences.org/articles/63751.
Training_with_optogenetics.m - Create and train a network with user defined optogenetic modulation Testing_with_optogenetics.m - Run the trained network with optogenetic manipulation
HelperFunctions/ will be added to your path by Training_with_optogenerics Figure Plotting Code/ contains code used to generate figures used in the paper
This code was run in MATLAB 2022a. Please direct any questions to jrozells@bu.edu or gavornik@bu.edu