turn on exome-only CNV filtering

jeremymcrae · Nov 21, 2017 · 17068b7 · 17068b7
1 parent ce6ce8d
commit 17068b7
Showing 1 changed file with 1 addition and 2 deletions.
diff --git a/clinicalfilter/variant/cnv.py b/clinicalfilter/variant/cnv.py
@@ -151,8 +151,7 @@ def passes_filters(self):
         elif "EXOME" in self.info["CALLSOURCE"]:
             # currently return false for all exome-only CNVs, undergoing testing
             filt = ExomeCNV(self)
-            # passes = filt.filter_cnv(track_variant)
-            passes = False
+            passes = filt.filter_cnv(track_variant)
         else:
             if track_variant:
                 print("CNV is not an aCGH or exome CNV")