GitHub - jfwalker/JFW_NonCore_Caryophyllales: Contains scripts and commands used in the phylogenomic analysis of the non core caryophyllales

jfwalker / JFW_NonCore_Caryophyllales Public

Contains scripts and commands used in the phylogenomic analysis of the non core caryophyllales

Notifications

Name		Name	Last commit message	Last commit date
Latest commit History 5 Commits
AAcode.R		AAcode.R
AddNameToNewick.pl		AddNameToNewick.pl
CDScode.R		CDScode.R
CheckIngroups.pl		CheckIngroups.pl
FinalCommands.pdf		FinalCommands.pdf
GeneHybridSplitter.pl		GeneHybridSplitter.pl
GeneJoin.pl		GeneJoin.pl
Ks_Plots.R		Ks_Plots.R
Ks_test.pl		Ks_test.pl
MultiKs.pl		MultiKs.pl
PieCharts.R		PieCharts.R
RemoveExtra.pl		RemoveExtra.pl
RemovePair.pl		RemovePair.pl
RemoveRAxML.pl		RemoveRAxML.pl
RemoveUnimformative.pl		RemoveUnimformative.pl
Rename_test.pl		Rename_test.pl
SwitchNames.pl		SwitchNames.pl
filter_1to1_orthologs.py		filter_1to1_orthologs.py
move_notes_labels_trees_raxml.py		move_notes_labels_trees_raxml.py
newick3.py		newick3.py
newick3.pyc		newick3.pyc
node.py		node.py
node.pyc		node.pyc
phylo3.py		phylo3.py
phylo3.pyc		phylo3.pyc
phyparts-0.0.1-SNAPSHOT-jar-with-dependencies(2).jar		phyparts-0.0.1-SNAPSHOT-jar-with-dependencies(2).jar
r_scripts.R		r_scripts.R
remove_top_blast.pl		remove_top_blast.pl
taxon_table		taxon_table
tree_reader.py		tree_reader.py
tree_reader.pyc		tree_reader.pyc
tree_utils.py		tree_utils.py
tree_utils.pyc		tree_utils.pyc