A Rust parser for the MinCED CRISPR array annotation tool.
Add the following to Cargo.toml:
minced-parser = 2.0.0
use std::fs::File;
use std::io::{BufReader, Read};
fn main() {
let file = File::open("minced.txt").unwrap();
let mut reader = BufReader::new(file);
let mut input = String::new();
reader.read_to_string(&mut input).unwrap();
let contigs = minced_parser::parse(&input).unwrap();
for contig in contigs {
println!("{} has {} arrays", contig.accession, contig.arrays.len());
}
}
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