Add test for NBIA series functions

jjjermiah · Feb 18, 2024 · 67777ef · 67777ef
1 parent 4073918
commit 67777ef
Showing 1 changed file with 21 additions and 0 deletions.
diff --git a/tests/test_nbia_series_functions.py b/tests/test_nbia_series_functions.py
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+import pytest
+from nbiatoolkit import nbia
+
+from src.nbiatoolkit import NBIAClient
+from src.nbiatoolkit.auth import OAuth2
+from src.nbiatoolkit.utils import *
+import pandas as pd
+
+
+@pytest.fixture(scope="session")
+def nbia_client():
+    nbia_client = NBIAClient()
+    return nbia_client
+
+
+@pytest.fixture(scope="session")
+def tcga_series(nbia_client):
+    tcga_series = nbia_client.getSeries(
+        Collection="TCGA-KIRC", PatientID="TCGA-BP-4989"
+    )
+    return tcga_series