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tool_provided_metadata_7.xml
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tool_provided_metadata_7.xml
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<tool id="tool_provided_metadata_7" name="tool_provided_metadata_7" profile="17.09" version="1.0.0">
<!-- Demonstrate setting discovered dataset metadata via galaxy.json for profile >= 17.09 tools. -->
<command>
echo "1" > sample1.report.tsv;
echo "2" > sample2.report.tsv;
cp $c1 galaxy.json;
</command>
<configfiles>
<configfile name="c1">{"sample": {
"datasets": [
{"filename": "sample1.report.tsv", "designation": "sample1", "name": "cool name 1", "ext": "txt", "info": "cool 1 info", "dbkey": "hg19"},
{"filename": "sample2.report.tsv", "designation": "sample2", "name": "cool name 2", "ext": "txt", "info": "cool 2 info", "dbkey": "hg19"}
]
}}
</configfile>
</configfiles>
<inputs>
<param name="input" type="data" />
</inputs>
<outputs>
<data name="sample">
<discover_datasets from_provided_metadata="true" visible="true" />
</data>
</outputs>
<tests>
<test>
<param name="input" ftype="txt" value="simple_line.txt"/>
<output name="sample">
<discovered_dataset designation="sample1" ftype="txt">
<assert_contents><has_line line="1" /></assert_contents>
<metadata name="name" value="cool name 1" />
<metadata name="dbkey" value="hg19" />
<metadata name="info" value="cool 1 info" />
</discovered_dataset>
<discovered_dataset designation="sample2" ftype="txt">
<assert_contents><has_line line="2" /></assert_contents>
<metadata name="name" value="cool name 2" />
<metadata name="info" value="cool 2 info" />
</discovered_dataset>
</output>
</test>
</tests>
</tool>