snemi-eval

A Fiji Python script to evaluate training volumes for the SNEMI3D challenge

This repo is combines Ignacio Arganda-Carreras's Beanshell script with my fiji-python repo, which encapsulates the advice given in my February 2014 blog post about writing command-line tools for Fiji's Jython interpreter.

Links

Here are some reference links for writing Fiji python scripts:

• Fiji
• ImageJ API documentation
• BioFormats API documentation
• Documentation for other common plugins
• ImageJ source code browser