Add github workflow and remove travis (#236)

.github/workflows/lint.yml

@@ -0,0 +1,20 @@
+name: Lintbb
+on: [push]
+jobs:
+  lint:
+    runs-on: ubuntu-latest
+    steps:
+        - uses: actions/checkout@v4
+        - name: Set up Python
+          uses: actions/setup-python@v4
+          with:
+            python-version: '3.x'
+        - name: Install dependencies
+          run: |
+            python -m pip install --upgrade pip
+            pip install .
+        - name: Lint with Ruff
+          run: |
+            pip install ruff
+            ruff --output-format=github .
+          continue-on-error: true

.github/workflows/test.yml

@@ -0,0 +1,29 @@
+name: Build
+on: [push]
+jobs:
+  test:
+    runs-on: ubuntu-latest
+    strategy:
+      matrix:
+        conda-deps:
+          - python=3.6 pandas=1.0 matplotlib=2.1.2 numpy=1.17
+          - pandas matplotlib numpy
+    steps:
+      - uses: actions/checkout@v4
+      - uses: conda-incubator/setup-miniconda@v3
+        with:
+          auto-update-conda: true
+      - name: conda debug info
+        shell: bash -el {0}
+        run: conda info -a
+      - name: install
+        shell: bash -el {0}
+        run: |
+          conda install pytest pytest-cov coveralls ${{ matrix.conda-deps }}
+          python setup.py install
+          cp ci/matplotlibrc matplotlibrc
+      - name: test
+        shell: bash -el {0}
+        run: pytest
+      - name: Coveralls
+        uses: coverallsapp/github-action@v2

.gitignore

@@ -20,6 +20,7 @@
 .ipynb_checkpoints
 .tags
 .cache/
+.direnv/
 
 # Compiled source #
 ###################
@@ -84,3 +85,4 @@ Thumbs.db
 *.cpp
 
 .pytest_cache
+.envrc

README.rst

@@ -164,10 +164,10 @@ References
     :alt: Latest version on PyPi
     :target: https://badge.fury.io/py/UpSetPlot
 
-.. |build| image:: https://travis-ci.org/jnothman/UpSetPlot.svg?branch=master
-    :alt: Travis CI build status
+.. |build| image:: https://github.com/jnothman/upsetplot/actions/workflows/test.yml/badge.svg
+    :alt: Github Workflows CI build status
     :scale: 100%
-    :target: https://travis-ci.org/jnothman/UpSetPlot
+    :target: https://github.com/jnothman/UpSetPlot/actions/workflows/test.yml
 
 .. |issues| image:: https://img.shields.io/github/issues/jnothman/UpSetPlot.svg
     :alt: Issue tracker

upsetplot/tests/test_data.py

@@ -3,7 +3,7 @@
 import pandas as pd
 import numpy as np
 from distutils.version import LooseVersion
-from pandas.util.testing import (assert_series_equal, assert_frame_equal,
+from pandas.testing import (assert_series_equal, assert_frame_equal,
                                  assert_index_equal)
 from upsetplot import (from_memberships, from_contents, from_indicators,
                        generate_data)

upsetplot/tests/test_reformat.py

@@ -1,6 +1,6 @@
 import pytest
 import pandas as pd
-from pandas.util.testing import assert_series_equal, assert_frame_equal
+from pandas.testing import assert_series_equal, assert_frame_equal
 
 from upsetplot import generate_counts, generate_samples
 from upsetplot import query

upsetplot/tests/test_upsetplot.py

@@ -2,7 +2,7 @@
 import itertools
 
 import pytest
-from pandas.util.testing import (
+from pandas.testing import (
     assert_series_equal, assert_frame_equal, assert_index_equal)
 from numpy.testing import assert_array_equal
 import pandas as pd