Text Mining Uses of Biodiversity Informatics in Research Literature

Installation

• We require python 3.4 or later
• We require Xpdf. (pdftotext)
• git clone https://github.com/joandamerow/lit-mining-occurrencedb.git
• cd lit-mining-occurrencedb
• It is recommended that you use a Python virtual environment for this project.
• Optional: virtualenv venv -p python3
• Optional: source venv/bin/activate
• pip3 install -r requirements.txt

Description

A set of utilities for text mining references to and uses of biodiversity informatics databases.