Peromyscus_crinitus

Code corresponding to comparative genomic investigation into Peromyscus crinitus (and P. eremicus, P. maniculatus)

Name		Name	Last commit message	Last commit date
Latest commit History 27 Commits
NGSadmix_PecrPeerPema.sh		NGSadmix_PecrPeerPema.sh
NGSrelate.sh		NGSrelate.sh
README.md		README.md
Step1_findVarSites.sh		Step1_findVarSites.sh
angsd2pca.sh		angsd2pca.sh
find_4closestGenes_2sweepsites.py		find_4closestGenes_2sweepsites.py
find_nth_percentile_CLRs.py		find_nth_percentile_CLRs.py
mds.sh		mds.sh
ortho2cafe.py		ortho2cafe.py
orthofinder_10spp.sh		orthofinder_10spp.sh
step2_varInvarSites.sh		step2_varInvarSites.sh
step6_TajDWindows.sh		step6_TajDWindows.sh
step7_correct_window_estimates.sh		step7_correct_window_estimates.sh
steps345_doStats.sh		steps345_doStats.sh
sweepfinder_fileprep_step1.sh		sweepfinder_fileprep_step1.sh
sweepfinder_fileprep_step2.sh		sweepfinder_fileprep_step2.sh
sweepfinder_run_step3.sh		sweepfinder_run_step3.sh

jpcolella/Peromyscus_crinitus