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| ^.*\.Rproj$ | ||
| ^\.Rproj\.user$ |
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| # History files | ||
| .Rhistory | ||
| .Rapp.history | ||
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| # Example code in package build process | ||
| *-Ex.R | ||
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| # RStudio files | ||
| .Rproj.user/ | ||
| .Rproj.user/* | ||
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| # RData | ||
| .RData | ||
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| # produced vignettes | ||
| vignettes/*.html | ||
| vignettes/*.pdf | ||
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| *.Rproj | ||
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| .Rproj.user |
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| Package: bubbleCloud | ||
| Type: Package | ||
| Title: d3 bubble plots | ||
| Version: 1.0 | ||
| Date: 2015-03-05 | ||
| Author: Juan Pablo Marín Díaz | ||
| Maintainer: Juan Pablo Marín Díaz <jpmarindiaz@gmail.com> | ||
| Description: d3 bubble plots | ||
| License: MIT + file LICENSE | ||
| Imports: | ||
| htmlwidgets (>= 0.3) |
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| The MIT License (MIT) | ||
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| Copyright (C) 2015, Jp Marín Díaz, http://github.com/jpmarindiaz/bubbleCloud | ||
|
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| Permission is hereby granted, free of charge, to any person obtaining a copy | ||
| of this software and associated documentation files (the "Software"), to deal | ||
| in the Software without restriction, including without limitation the rights | ||
| to use, copy, modify, merge, publish, distribute, sublicense, and/or sell | ||
| copies of the Software, and to permit persons to whom the Software is | ||
| furnished to do so, subject to the following conditions: | ||
|
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| The above copyright notice and this permission notice shall be included in | ||
| all copies or substantial portions of the Software. | ||
|
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| THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR | ||
| IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, | ||
| FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE | ||
| AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER | ||
| LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, | ||
| OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN | ||
| THE SOFTWARE. |
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| exportPattern("^[^\\.]") |
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| #' <Add Title> | ||
| #' | ||
| #' <Add Description> | ||
| #' | ||
| #' @import htmlwidgets | ||
| #' | ||
| #' @export | ||
| bubbles <- function(data, name = "bubbleForce", width = NULL, height = NULL) { | ||
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| # if(is.null(data$id)) data$id <- seq(1:nrow(data)) | ||
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| if(!"data.frame" %in% class(data)) { | ||
| stop("data must be a dataframe") | ||
| } | ||
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| if (is.null(data$x)){ | ||
| message("No node x position provided: using random value") | ||
| data$x <- runif(nrow(data),1,10) | ||
| } | ||
|
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| if (is.null(data$y)){ | ||
| message("No node y position provided: using random value") | ||
| data$y <- runif(nrow(data),1,10) | ||
| } | ||
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| if (is.null(data$radius)){ | ||
| message("No radius provided: using fixed value = 5") | ||
| data$radius <- 5 | ||
| } | ||
|
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| if (is.null(data$cluster)){ | ||
| data$cluster <- 0 | ||
| } | ||
|
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| clusters <- ddply(data,.(cluster),function(r){ | ||
| r <- r[with(r,order(radius)),] | ||
| head(r,1) | ||
| }) | ||
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| n <- nrow(data) | ||
| m <- nrow(clusters) | ||
|
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| # Convert to array of objects | ||
| data <- apply(data, 1,function(r){ | ||
| as.list(r) | ||
| }) | ||
| names(data) <- NULL | ||
|
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| clusters <- apply(clusters, 1,function(r){ | ||
| as.list(r) | ||
| }) | ||
|
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| x = list( | ||
| n = n, | ||
| m = m, | ||
| data = data, | ||
| clusters = clusters | ||
| ) | ||
|
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| # create widget | ||
| htmlwidgets::createWidget( | ||
| name = name, | ||
| x, | ||
| width = width, | ||
| height = height, | ||
| package = 'bubbleCloud', | ||
| sizingPolicy = htmlwidgets::sizingPolicy( | ||
| viewer.padding = 0, | ||
| browser.fill = TRUE | ||
| ) | ||
| ) | ||
| } | ||
|
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| #' Widget output function for use in Shiny | ||
| #' | ||
| #' @export | ||
| bubblesOutput <- function(outputId, width = '100%', height = '400px'){ | ||
| shinyWidgetOutput(outputId, 'bubble', width, height, package = 'bubbleCloud') | ||
| } | ||
|
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| #' Widget render function for use in Shiny | ||
| #' | ||
| #' @export | ||
| renderBubbles <- function(expr, env = parent.frame(), quoted = FALSE) { | ||
| if (!quoted) { expr <- substitute(expr) } # force quoted | ||
| shinyRenderWidget(expr, dimplerOutput, env, quoted = TRUE) | ||
| } |
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| library(devtools) | ||
| library(htmlwidgets) | ||
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| devtools::install() | ||
| library(bubbleCloud) | ||
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| data <- read.csv("inst/data/bubbles.csv") | ||
| data2 <- data[1:50,] | ||
| #bubbles(data) | ||
| bubbles(data2[c("cluster")]) | ||
|
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| bubbles(data2[,2:4]) | ||
| bubbles(data2[,2:4]) | ||
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| data3 <- data | ||
| data3$cluster <- 0 | ||
| bubbles(data3) | ||
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| #data <- data[,1] | ||
| #bubbles(data) | ||
|
|
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| Original file line number | Diff line number | Diff line change |
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| 6,15.359903692875609,319.0821848533295,133.3747934358064 | ||
| 3,13.568389812372281,418.8652145653677,440.2539875845134 | ||
| 6,1.4321784913691942,318.9563855066143,132.56184636115654 | ||
| 9,0.9471094046368066,642.0822761626268,132.73577473697802 | ||
| 5,3.3717434589552404,280.9397696889937,250.08335696277211 | ||
| 9,10.254592222847506,642.5740811880032,132.8576240431386 | ||
| 7,7.145903056380374,418.5353798028726,60.09000974845256 | ||
| 5,7.358971054412516,280.60735160531476,250.58782523591074 | ||
| 4,7.543337862575298,318.62116642861554,368.5085377065596 | ||
| 2,0.37799481143106267,542.1714662545647,440.5577527410526 | ||
| 3,10.74018738983036,418.9643924672336,440.25854109974466 | ||
| 6,8.710530978872196,319.0430975366097,132.63080321008897 | ||
| 1,4.716853892332194,642.789415219967,368.4027616834399 | ||
| 2,1.0019810534766413,542.5609005814705,441.06203612756804 | ||
| 7,7.037294996766205,418.24699311081247,60.40061640760976 | ||
| 7,0.5432228877426432,419.1736431541566,60.013574541761756 | ||
| 6,16.235785269535214,318.2821454448339,132.76319058764352 | ||
| 8,10.99041820674714,542.4136740359763,59.88500420491323 | ||
| 4,7.798916414563655,319.0288604754668,368.0503200903666 | ||
| 6,7.395686325443695,318.81158982293607,132.6016639353577 | ||
| 6,18.275258256185857,318.5271147911616,132.46480538033506 | ||
| 0,2.8710507712945685,680.603203356266,250.76448760717176 | ||
| 7,7.760514100563604,418.48387544026525,60.285001259978145 | ||
| 2,9.424215674750943,541.9880334601559,441.1497093057435 | ||
| 4,5.005569190024609,318.3001056693673,367.86292593541003 | ||
| 7,10.035869374119926,418.51720316039325,60.08993371923569 | ||
| 1,3.8865898728352515,642.7683569196898,367.7784947793596 | ||
| 7,10.293318790683138,418.5320062724121,60.222430960956245 | ||
| 2,7.233085962035134,542.6898302744895,440.60510418821946 | ||
| 4,7.294801709580865,318.3460521244623,368.1742118255832 | ||
| 3,5.254472553733428,418.23238114320606,440.2534820207104 | ||
| 4,5.495118604610564,318.96154943184854,367.5764557135888 | ||
| 8,7.272187246653192,542.774772040947,60.57896031111591 | ||
| 5,6.987138494734555,280.1132306647487,250.51683337916623 | ||
| 4,5.609004479085082,318.639339774213,368.2245523751379 | ||
| 0,7.85039088981628,680.5493812658824,250.2790705950465 | ||
| 7,9.203129056006496,418.7204606822405,59.92684862481545 | ||
| 7,8.843972167702068,419.1624218333226,60.66844439993727 |
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