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  • Netherlands Cancer Institute (NKI-AVL)
  • Amsterdam
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@codeforsystemsbiology
  • Netherlands Cancer Institute (NKI-AVL)
  • Amsterdam
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Pinned

  1. Jupyter notebooks and code accompanying our paper "Insertional mutagenesis identifies drivers of a novel oncogenic pathway in invasive lobular breast carcinoma" in Nature Genetics (2017).

    Jupyter Notebook

  2. Tool for identifying transposon insertions and their effects from RNA-seq data.

    Python 3

  3. Tool for identifying transposon insertions from targeted DNA-sequencing data.

    Python 1

  4. A simple pythonic interface to biomart.

    Python 21 7

  5. Library for visualising genomic features in Python.

    Python 10 1

  6. Composable filesystem hooks and operators for Apache Airflow.

    Python 10 5

23 contributions in the last year

Mar Apr May Jun Jul Aug Sep Oct Nov Dec Jan Feb Mon Wed Fri

Contribution activity

February 2020

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