06-file-systems.md

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title: File Systems notebook: Distributed Systems layout: note date: 2020-10-22 tags: ...

DFS Summary

• key design issues for distributed file systems
  • effective client caching for performance similar to local file system
  • maintaining consistency of files copied in multiple client caches
  • recovery from server/client failure
  • high throughput for reading/writing files
  • scalability

File Systems

• filesystem vs file system:

  • filesystem: set of files held in a storage device/partition
  • file system: software component providing access to files

• file system: provides

  • convenient programming interface for persistent/disk storage
  • name space (hierarchical/flat)
  • sharing of data between users
    • access control
    • file-locking

• access files in early days of networking

  • FTP, Telnet
  • lacks transparency: need to know IP address, as well as directory structure

• distributed file system: emulates non-distributed file system for client programs running on multiple remote computers

  • transparency: local computing, with a remote file system

• file service: allow programs to store and access remote files as they do local ones

  • access files from any computer on intranet
  • hosts providing such services can be optimised for multiple disk drives, and can supply file services for other services (web, email)
  • facilitates backup and archiving

• files: data + attributes

  • data: sequence of bytes that can be accessed/modified
  • attributes: timestamps, file type, owner, access control lists

• files have a name.

• directory: file containing list of other files

File System Layers

• Directory: relate file names to IDs
• File: relate file IDs to particular files
• Access control: check permissions for requested operations
• File access: read/write file data/attributes
• Block: access/allocate disk blocks
• Device: disk IO and buffering

UNIX file system operations

• open
• create
• close
• read
• write
• lseek: move read/write pointer to new position in the file
• link: add new name for file
• stat: get file attributes

Distributed File System Requirements

• e.g. Hadoop

Transparency

• Access: clients unaware of distribution of files
  • uniform API for accessing local and remote files
• Location: clients see a uniform file name space
  • names of files should be consistent regardless of where the file is physically stored
• Mobility: client programs/admin services don't need to change when the files are physically moved
• Performance: client programs should perform satisfactorily while the load varies in specified range
• Scaling: service can be expanded by incremental growth

Concurrent file updates

• multiple clients' updates should not interfere with each other
• should be able to manage policies
• solutions
  • file, record-level locking
  • isolation

File replication

• multiple copies of files over several servers: reduced latency, scalability, fault tolerance
• requires other copies are updated when one copy is modified
• full replication is challenging to implement
• solutions
  • cache all/part of file: gives many benefits

Heterogeneity

• client and server should be able to operate on various hardware/OS
• i.e. design must be compatible with the file system of different OS
• use protocols to standardise operations with server

Fault tolerance

• transient communication problems shouldn't result in file corruption
• system should still function as much as possible when clients/server fails
• faults need to be detected, reported, and corrected
• invocation semantics: can be
  • at-most-once
  • at-least-once: simpler, but requires idempotent operations
• servers can be stateless such that there is no recovery required if a server goes down
• solutions
  • redundant copies of data, redundant hardware, backups, transaction logs
  • stateless servers
  • idempotent operations

Consistency

• multiple, concurrent access to file should see consistent representation of the file
  • complete, current, correct
• differences in file's location/update latencies shouldn't make the file look different at different times
• file metadata should be consistent on all clients
• particular concern when data is replicated
• solutions:
  • timestamps and ownership info

Security

• file systems need to be protected against
  • unathorised access
  • data corruption
  • loss and other threats
• solutions:
  • access control: ownership, permissions
  • client requests should be authenticated
  • data transfer should be encrypted

Efficiency

• comparable to conventional file systems

File Service Architecture

• abstract architecture based on NFS

Flat file service

• implements operations on contents of files
• UFID, Unique File Identifier given to flat file service to refer to the file to operate on
  • unique over all files in the distributed system
• flat file service creates a new UFID for each new file it creates

Directory service

• maps between text file names and UFID
• creates directories, and manages files within them
• client of flat file service, as directory files are stored there

Client module

• integrates directory service and flat file service to provide API expected by client applications
• client maintains a list of available file servers
• caching to improve performance

Flat file service interface

• UNIX interface requires the filesystem to maintain state (in the file pointer), which is manipulated during read/write
• flat file service differs from UNIX interface for fault tolerance
  • repeatable operations: except for Create, operations are idempotent, permitting at-least-once RPC semantics
  • stateless server: flat file service doesn't need to maintain state. Can be restarted after failure and resume operation without need for clients/server to restore any state
  • files can be accessed immediately, c.f. UNIX where they first need to be opened

RPC Calls

• Read(UFID, i, n) -> Data: read up to $n$ items from position $i$ in the file
• Write(UFID, i, Data): write data starting at position $i$ in the file
• Create() -> UFID: creates a new file of length 0, and returns its UFID
• Delete(UFID): remove file from file store
• GetAttributes(UFID) -> Attr
• SetAttributes(UFID, Attr)

Flat file service access control

• service needs to
  • authenticate RPC caller
  • prevent illegal operations: e.g. legal UFIDs, enforce access privileges
• cannot store access control state: would break idempotency
• options:
  • access check made whenever file name is converted to UFID, and results encoded as a capability returned to client for submission to flat file server
  • user ID can be submitted for every request, with access checks performed by flat file server for each file operation

Directory service interface

• primary purpose: translation from file name to UFID
• directory server maintains directory files, which store this mapping
• directory files themselves are stored in flat file server: directory server is a client of the flat file server
• in a hierarchical file system, the client function can make requests for UFIDs corresponding to each component of the pathname

Interface

• Lookup(Dir, Name) -> UFID: return UFID for file name in given directory
• AddName(Dir, Name, UFID): add file name with UFID to directory
• UnName(Dir, Name): remove file name from directory
• GetNames(Dir, Pattern) -> Names: return all names matching a pattern

File Group

• file group: collection of files on a given server
• server may hold several file groups, and file groups can be moved between servers
• files cannot change file group
• permits file service to be implemented across several servers
• files given UFIDs that ensure uniqueness across different servers
  • e.g. concatenate server IP address with a date the file was created
  • permits files in a group (i.e. files with common file group id) to be relocated to a different server without conflicting with files already on that server
• mapping of UFIDs to servers can be cached at client module

Sun Network File System

• uses architecture described above
• many implementations of NFS following NFS protocols, using a set of RPCs that provide means for the client to perform operations on the remote file store
• NFS client makes requests to NFS server to access files

Virtual File System

• Virtual file system (VFS): used by UNIX to provide transparent access to any number of different file systems, combining remote and local file systems into a single filesystem
  • maintains VFS structure for each filesystem in use
  • maintains v-node for each open file, which records whether file is local/remote
    • if local, v-node contains reference to i-node on UNIX file system
    • if remote, v-node contains reference to files NFS file handle, a combo of filesystem identifier, i-node number and any other identifying info
• NFS integrated in the same way

Client Integration

• emulates UNIX file system primitives closely
• NFS client is integrated within the kernel, meaning:
  • user programs can access files using UNIX system calls without recompiling or reloading
  • one client module serves all user-level processes (with a shared cache)
  • encryption key used to authenticate user IDs passed to the server can be retained in the kernel: this prevents impersonation by user-level clients
• client transfers blocks of files from server host to local host and caches them
  • shares the same buffer cache used for local IO
  • as several hosts may access the same remote file concurrently, caching poses a consistency problem

Server Interface

• NFS server interface integrates directory and file ops in a single service
• create(filename, targetDirectoryHandle): both creates and inserts file names in directories in a single operation
• primitives resemble UNIX filesystem primitives

Mount Service

• mount service: process running at user level of an NFS server computer, allowing clients to mount subtrees of remote filesystems
• each server maintains a file (/etc/exports) describing the parts of the local filesystems available for remote mounting
• clients use a modified UNIX mount to request mounting of a remote filesystem, which communicates using an RPC mount protocol
• remote filesystems can be hard/soft-mounted in a client's file system:
  • hard-mounted filesystem: blocks on each access until the access is complete
    • i.e. a user-level process accessing a file is suspended until the request is completed
    • if the remote host is unavailable, the NFS client module continues to retry until the request is satisfied
  • soft-mounted filesystem: retries a few times before returning an error to the calling process

Server caching

• conventional UNIX systems: data read from disk/pages are retained in main memory buffer cache, and evicted when buffer space is needed. Accesses to the cache do not require disk access
  • read-ahead: anticipates read accesses, fetches pages following those recently read
  • delayed-write/write-back: optimises writes to disk by only writing pages when both modified and evicted
    • UNIX sync flushes modified pages every 30s
  • works for conventional filesystem on single host, because there is only 1 cache and file accesses cannot bypass it
• use of cache at server for client reads introduces no problems
• use of cache for writes requires special care: client needs to be confident writes are persistent if server crashes
• options: cache policies used by the server
  • Write-through: data written to cache and directly to disk
    • client can be sure data is stored persistently as soon as the reply is received
    • increases disk I/O and latency for write
    • operation completes when the data has been written to disk
    • poor when server receives large number of write requests for the same data: causes performance bottleneck
    • saves network bandwidth
  • Commit: data is written to cache and is only written to disk when a commit operation is received for the data
    • reply sent when data has been written to disk
    • client can be sure data is persistently stored only when a reply to a commit has been received
    • uses more network bandwidth
    • may lead to uncommitted data being lost
    • receives full benefit of cache
    • standard NFS clients use this mode, issuing commit whenever a file open for writing is closed

Client Caching

• NFS Client caches data reads, writes, attributes and directory operations to reduce network IO

• caching at the client: problem for cache consistency, as different caches on multiple clients, and the server

• reading and writing are both problems: a write on another client between two reads will lead to the second read being incorrect

• NFS clients are responsible for polling the server for currency of cached data (i.e. are there any updates?)

• timestamp method is used to validate cached blocks before used

• each item in the cache is tagged with 2 timestamps:

  • $T_c$: time when a cache block was last validated by the client
  • $T_m$: time when a block was last modified

• cache block is valid at time $T$ if

  • $T-T_c < t$ where $t$ is a freshness interval, or
  • $T_{m, client}= T_{m,server}$: i.e. the data hasn't been modified at the server since the cache entry was made

• value of $t$ is a trade off between consistency and efficiency

• small value for $t$ leads to close approximation of one-copy consistency, but costs greater network IO

• in Sun Solaris clients $t$ is set adaptively (3-30s) depending on file update frequency

  • for directories its only 30-60s, as there is a lower risk of concurrent updates

• validity check is made on each access to a cache block

  • first half of check requires no network IO, and if this is true, the second condition need not be checked

• separate server $T_{m,server}$: kept by server for file attributes

  • if first half of check is found to be false, the client contacts the server to retrieve $T_{m, server}$ for file attributes
  • if it matches $T_{m,client}$ then cache block is valid, and client sets $T_c$ to the current time
  • otherwise, cache block is invalid, and the client must request a new copy

• traffic can be reduced by applying new values of $T_{m,server}$ to all relevant cache blocks and piggy-backing attribute values with results of every operation on the file

• write-back is used for writes, where modified files are flushed when a file is closed or when a sync operation takes place in the VFS.

  • special purpose daemon is used to do this asynchronously

NFS Summary

• $\checkmark$ access transparency: applications are usually unaware files are remote
• $\times$ location transparency: not enforced; no global namespace as different clients can mount filesystems at different points
• $\times$ mobility transparency: if server changes, the client must be updated
• $\thicksim$ scalability: good, can be better. System can grow to accommodate more servers as needed. Bottlenecks when many processes access a single file.
• $\times$ file replication: not supported for updates. Additional services can be added to do this
• $\checkmark$ Hardware/OS heterogeneity: NFS implemented on most OS and hardware platforms
• $\checkmark$ fault tolerance: acceptable. NFS is stateless, idempotent. Options to handle failures
• $\checkmark$ consistency: tunable. not recommended for close synchronisation between processes
• $\checkmark$ security: Kerberos is integrated with NFS. Secure RPC also an option
• $\checkmark$ efficiency: acceptable, can be tuned.

Cloud Storage

Dropbox

• 100+ millions users, 1 billion files/day
• design
  • small client with minimal resource usage
  • works with a low-capacity/disrupted network
  • backend scales
• read/write ratio of 1:1 c.f. typical value of 100:1 for Twitter/Facebook
• traffic only when changes occur
• uses compression to reduce traffic