Name		Name	Last commit message	Last commit date
Latest commit History 24 Commits
Figures		Figures
Starter_pipeline		Starter_pipeline
Add_new_variables_to_basic_dataframe.ipynb		Add_new_variables_to_basic_dataframe.ipynb
Basic_stats_plots.ipynb		Basic_stats_plots.ipynb
DataframeMaintenance.ipynb		DataframeMaintenance.ipynb
Dataframe_to_mongodb.ipynb		Dataframe_to_mongodb.ipynb
Example-Analysis-Pipeline.ipynb		Example-Analysis-Pipeline.ipynb
Figure_1A.ipynb		Figure_1A.ipynb
Figure_1B.ipynb		Figure_1B.ipynb
Figure_1D_1E.ipynb		Figure_1D_1E.ipynb
Figure_2A.ipynb		Figure_2A.ipynb
Figure_2B_3A_3B.ipynb		Figure_2B_3A_3B.ipynb
Figure_2C_2D.ipynb		Figure_2C_2D.ipynb
Figure_4A.ipynb		Figure_4A.ipynb
Figure_4B.ipynb		Figure_4B.ipynb
Figure_4c_boxplots_PNAS_PRL_Science_Nature.ipynb		Figure_4c_boxplots_PNAS_PRL_Science_Nature.ipynb
First_plots.ipynb		First_plots.ipynb
Get_wos_keywords.ipynb		Get_wos_keywords.ipynb
Journal-and-Article-Type-Filtering.ipynb		Journal-and-Article-Type-Filtering.ipynb
PLOS_WOS_dicts.ipynb		PLOS_WOS_dicts.ipynb
PLOSone_search_subjects_from_DOI.ipynb		PLOSone_search_subjects_from_DOI.ipynb
Plos_SearchAPI_XML.ipynb		Plos_SearchAPI_XML.ipynb
Prob_citing_ref_by_successful_plos.ipynb		Prob_citing_ref_by_successful_plos.ipynb
README.md		README.md
Regex-Analysis-Time-Windows.ipynb		Regex-Analysis-Time-Windows.ipynb
SCRIPT_add_team_size_expertise_recycled_ref_FIRST_PART.py		SCRIPT_add_team_size_expertise_recycled_ref_FIRST_PART.py
SCRIPT_add_team_size_expertise_recycled_ref_FOURTH_PART.py		SCRIPT_add_team_size_expertise_recycled_ref_FOURTH_PART.py
SCRIPT_add_team_size_expertise_recycled_ref_SECOND_PART.py		SCRIPT_add_team_size_expertise_recycled_ref_SECOND_PART.py
SCRIPT_add_team_size_expertise_recycled_ref_THIRD_PART.py		SCRIPT_add_team_size_expertise_recycled_ref_THIRD_PART.py
SCRIPT_process_disambig_author_data.py		SCRIPT_process_disambig_author_data.py
Topics_of_references.ipynb		Topics_of_references.ipynb
Trajectory-retrieval.ipynb		Trajectory-retrieval.ipynb
Trajectory-retrieval_original.ipynb		Trajectory-retrieval_original.ipynb
Untitled.ipynb		Untitled.ipynb
box_plot_offset_PNAS.png		box_plot_offset_PNAS.png
box_plot_offset_PRE.png		box_plot_offset_PRE.png
citations_in_paper_v3.png		citations_in_paper_v3.png
dump_data_ref_to_json.ipynb		dump_data_ref_to_json.ipynb
dump_data_to_json.ipynb		dump_data_to_json.ipynb
fig4b.png		fig4b.png
fig4b_2.png		fig4b_2.png
fig4c.png		fig4c.png
get_plos_one_DOIs.py		get_plos_one_DOIs.py
output_selection_disambig_records.txt		output_selection_disambig_records.txt
plot_just_colorbars.ipynb		plot_just_colorbars.ipynb
plotting_boxplots_PNAS_PRL_Science_Nature.ipynb		plotting_boxplots_PNAS_PRL_Science_Nature.ipynb
plotting_boxplots_time_evol_num_cit_methods_papers.ipynb		plotting_boxplots_time_evol_num_cit_methods_papers.ipynb
plotting_time_series_UT_citation_count.ipynb		plotting_time_series_UT_citation_count.ipynb
process_disambig_author_data.ipynb		process_disambig_author_data.ipynb
queries_PRL_Nature_Science_PNAS_etc.ipynb		queries_PRL_Nature_Science_PNAS_etc.ipynb
queries_method_papers_for_time_evol_num_cit.ipynb		queries_method_papers_for_time_evol_num_cit.ipynb
select_merged_df_by_article_type.ipynb		select_merged_df_by_article_type.ipynb
temp-plot.html		temp-plot.html
testing_annotated_heatmap_color.html		testing_annotated_heatmap_color.html
time_evolution_ref_ut_location.ipynb		time_evolution_ref_ut_location.ipynb

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my_In_text_citations

Main codes to plot the figures from the paper:

Figure_1A.ipynb Figure_1B.ipynb Figure_1D_1E.ipynb Figure_2A.ipynb Figure_2B_3A_3B.ipynb Figure_2C_2D.ipynb Figure_4A.ipynb Figure_4B.ipynb Figure_4c_boxplots_PNAS_PRL_Science_Nature.ipynb

Code to generate secondary variables from the initial data set that Nathan built: Add_new_columns_to_basic_dataframe.ipynb

juliettapc/my_In_text_citations

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