Merge pull request #191 from gnestor/msa-css

Fix build issue caused by JS comment in msa CSS

packages/fasta-extension/src/index.ts

@@ -11,7 +11,7 @@ import { IRenderMime } from '@jupyterlab/rendermime-interfaces';
 
 import * as msa from 'msa';
 
-import 'msa/css/msa.css';
+import '../style/msa.css';
 
 import '../style/index.css';
 

packages/fasta-extension/style/msa.css

@@ -0,0 +1,226 @@
+/* BASIC */
+
+.biojs_msa_div {
+}
+
+.biojs_msa_stage {
+  cursor: default;
+  line-height: normal;
+  font-family: Helvetica;
+}
+
+.biojs_msa_seqblock {
+  cursor: move;
+}
+
+.biojs_msa_layer {
+  display: block;
+  white-space: nowrap;
+}
+
+.biojs_msa_labels {
+  color: black;
+  display: inline-block;
+  white-space: nowrap;
+  cursor: pointer;
+  vertical-align: middle;
+  overflow: hidden;
+  text-overflow: clip;
+  /*margin:auto; */
+  text-align: left;
+}
+
+.biojs_msa_header {
+  white-space: nowrap;
+  text-align: left;
+}
+
+.biojs_msa_labelrow:before {
+  content: '';
+  display: inline-block;
+  width: 0;
+  height: 100%;
+  vertical-align: middle;
+}
+
+.biojs_msa_labelrow {
+  height: 100%;
+}
+
+.biojs_msa_labelblock::-webkit-scrollbar,
+.biojs_msa_rheader::-webkit-scrollbar {
+  /* FIX scrollbars on Mac */
+  -webkit-appearance: none;
+  width: 7px;
+  height: 7px;
+}
+.biojs_msa_labelblock::-webkit-scrollbar-thumb,
+.biojs_msa_rheader::-webkit-scrollbar-thumb {
+  border-radius: 4px;
+  background-color: rgba(0, 0, 0, 0.5);
+  box-shadow: 0 0 1px rgba(255, 255, 255, 0.5);
+}
+
+/* END BASIC */
+/* Marker */
+
+.biojs_msa_marker {
+  color: #999;
+  white-space: nowrap;
+}
+
+.biojs_msa_marker .msa-col-header {
+  cursor: pointer;
+  cursor: pointer;
+  text-align: center;
+}
+
+.biojs_msa_marker .msa-col-header:hover {
+  color: #f00;
+}
+
+/* END Marker */
+/* Menubar */
+
+.smenubar .smenubar_alink {
+  background: #3498db;
+  background-image: -webkit-linear-gradient(top, #3498db, #2980b9);
+  background-image: -moz-linear-gradient(top, #3498db, #2980b9);
+  background-image: -ms-linear-gradient(top, #3498db, #2980b9);
+  background-image: -o-linear-gradient(top, #3498db, #2980b9);
+  background-image: linear-gradient(to bottom, #3498db, #2980b9);
+  -webkit-border-radius: 28;
+  -moz-border-radius: 28;
+  border-radius: 28px;
+  font-family: Arial;
+  color: #ffffff;
+  padding: 3px 10px 3px 10px;
+  margin-left: 10px;
+  text-decoration: none;
+}
+.smenubar {
+  display: inline-block;
+}
+
+.smenubar .smenubar_alink:hover {
+  cursor: pointer;
+}
+
+/* jquery dropdown CSS */
+
+.smenu-dropdown {
+  position: absolute;
+  z-index: 9999999;
+  display: none;
+}
+
+.smenu-dropdown .smenu-dropdown-menu,
+.smenu-dropdown .smenu-dropdown-panel {
+  min-width: 160px;
+  max-width: 360px;
+  list-style: none;
+  background: #fff;
+  border: solid 1px #ddd;
+  border: solid 1px rgba(0, 0, 0, 0.2);
+  border-radius: 6px;
+  box-shadow: 0 5px 10px rgba(0, 0, 0, 0.2);
+  overflow: visible;
+  padding: 4px 0;
+  margin: 0;
+}
+
+.smenu-dropdown .smenu-dropdown-panel {
+  padding: 10px;
+}
+
+.smenu-dropdown.smenu-dropdown-scroll .smenu-dropdown-menu,
+.smenu-dropdown.smenu-dropdown-scroll .smenu-dropdown-panel {
+  max-height: 358px;
+  overflow: auto;
+}
+
+.smenu-dropdown .smenu-dropdown-menu li {
+  list-style: none;
+  padding: 0 0;
+  margin: 0;
+  line-height: 18px;
+}
+
+.smenu-dropdown .smenu-dropdown-menu li,
+.smenu-dropdown .smenu-dropdown-menu label {
+  display: block;
+  color: #555;
+  text-decoration: none;
+  line-height: 18px;
+  padding: 3px 15px;
+  white-space: nowrap;
+}
+
+.smenu-dropdown .smenu-dropdown-menu li:hover,
+.smenu-dropdown .smenu-dropdown-menu label:hover {
+  background-color: #08c;
+  color: #fff;
+  cursor: pointer;
+}
+
+.smenu-dropdown .smenu-dropdown-menu .smenu-dropdown-divider {
+  font-size: 1px;
+  border-top: solid 1px #e5e5e5;
+  padding: 0;
+  margin: 5px 0;
+}
+
+/* END Menubar */
+
+.biojs_msa_div {
+  position: relative;
+}
+
+.biojs_msa_scale {
+  position: absolute;
+  bottom: 0;
+  right: 0;
+  background-color: #fff;
+  box-shadow: 0 2px 3px #999;
+  border-radius: 3px;
+  margin: 5px 0 0 auto;
+  padding: 5px;
+  text-align: center;
+}
+.biojs_msa_scale .msa-btngroup {
+  margin: 5px auto 0;
+}
+.biojs_msa_scale [type='range'] {
+  cursor: pointer;
+}
+
+.biojs_msa_scale .msa-scale-minimised {
+}
+.biojs_msa_scale .msa-scale-minimised {
+}
+.biojs_msa_scale .msa-btn-close {
+  text-align: right;
+  font-size: 0.8em;
+  padding: 2px;
+}
+.biojs_msa_scale .msa-btn-open {
+  background-color: #fff;
+}
+
+.biojs_msa_scale .msa-hide {
+  display: none;
+}
+
+.msa-btn {
+  cursor: pointer;
+  font-size: 1.1em;
+  display: inline-block;
+  padding: 2px 8px;
+  margin-bottom: 0;
+  border: 1px solid transparent;
+  border-radius: 4px;
+  box-sizing: border-box;
+}
+.msa-btn:hover {
+  background-color: #ddd;
+}