Related Clinical Ontologies

A package to suggest related clinical ontologies
(LOINC, SNOMED-CT, etc.)

Table of Contents

1. About
2. Getting Started
   • Prerequisites
   • Installation
3. Usage
4. License
5. Acknowledgments

About

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Getting Started

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Requirements

The package requires the following to run:

• Pandas~=1.4.2
• NumPy~=1.22.3
• SciPy~=1.7.3
• Scikit-learn~=1.1.1
• PyYAML >= 6.0
• Ftfy >= 6.1.1
• Fuzzywuzzy >= 0.18.0
• Jaro-Winkler >= 2.0.0

All packages are listed in requirements.txt.

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Installation

pip install related_ontologies

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Usage

import related_ontologies

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License

Distributed under the MIT License.

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Acknowledgments

• Alistair Johnson, DPhil | The Hospital for Sick Children

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