GitHub - jw4hv/HierarchicalBayesianAtlasBuild: A Bayesian atlas building framework with hierarchical priors

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A Bayesian atlas building framework with hierarchical priors

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Name		Name	Last commit message	Last commit date
Latest commit History 7 Commits
CMake		CMake
Cxx		Cxx
Data		Data
ITKIOFactoryRegistration		ITKIOFactoryRegistration
Testing		Testing
.DS_Store		.DS_Store
CMakeLists.txt		CMakeLists.txt
Copyright.txt		Copyright.txt
Installation.txt		Installation.txt
Makefile		Makefile
README.txt		README.txt
cmake_install.cmake		cmake_install.cmake
libGeodesicShooting.a		libGeodesicShooting.a
libTpca.a		libTpca.a

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This is a free C++ library of a Bayesian atlas building framework with hierarchical priors.

The implementation includes image matching by Maximum A Posterior (MAP) and Monte Carlo Expectation Maximization (MCEM) for atlas building algorithms for 2D/3D medical images. 

Our code uses basic modules from FLASH (https://bitbucket.org/FlashC/flashc/src/master/).

This code is only for research purpose, and we request you to cite our research paper if you use it:

Bayesian Atlas Building with Hierarchical Priors for Subject-specific Regularization.
Jian Wang, Miaomiao Zhang. Medical Image Computing and Computer Assisted Intervention (MICCAI), 2021.

Frequency diffeomorphisms for efficient image registration.
Miaomiao Zhang et al. Information Processing in Medical Imaging (IPMI), 2017.