chemical-genetic-matrix

Source code submission relating to Chemical Genetic Matrix in Scientific Data

Getting Started

The scripts provided will produce data and figures used to build the chemical genetic matrix dataset.

The prerequisites will be installed by running PackageInstallation.R from your local R environment.

The different folders contain the source code and the data needed to analyse the data and produce the figures presented in the publications.

Normalisation - Source code to analyse/normalise the raw data obtained for the CGM
Visualisation - Source code to create graphs used on ChemGRID.org and in the publications
Z-Factor - Source code to reproduce Z-Factor Violin plots as shown in the publication
HeatMaps - Data and source code to reproduce the figures in the publication
Prediction - Source code to run the Sonar (NBL^RF) analysis used in the Cell Systems publication
Data - Data files required to run the prediction source code

Name		Name	Last commit message	Last commit date
Latest commit History 10 Commits
Data		Data
HeatMaps		HeatMaps
Normalisation		Normalisation
Prediction		Prediction
Visualisation		Visualisation
ZFactor		ZFactor
.gitignore		.gitignore
PackageInstallation.R		PackageInstallation.R
README.md		README.md