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ncov
ncov Public templateForked from nextstrain/ncov
Nextstrain build for novel coronavirus SARS-CoV-2
Python
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nextclade
nextclade PublicForked from nextstrain/nextclade
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement
C++
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outbreak.info
outbreak.info PublicForked from outbreak-info/outbreak.info
During outbreaks of emerging diseases such as COVID-19, efficiently collecting, sharing, and integrating data is critical to scientific research. outbreak.info is a resource to aggregate all this i…
Vue
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wastewater_analysis
wastewater_analysis PublicForked from baymlab/wastewater_analysis
Variant abundance estimation for SARS-CoV-2 in wastewater using RNA-Seq quantification
Python
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wastewater_sarscov2
wastewater_sarscov2 PublicForked from alexcritschristoph/wastewater_sarscov2
A repository for sharing data, analyses, and results from Bay Area wastewater Sars-CoV-2 sequencing
Jupyter Notebook
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