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add -pc to acceptance test
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adamdingliang committed Dec 3, 2021
1 parent d015749 commit c03c5e4
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion tests/test_sjaracne_acceptance.py
Original file line number Diff line number Diff line change
Expand Up @@ -10,7 +10,7 @@
class TestSJARACNe(unittest.TestCase):
def test_acceptance(self):
with tempfile.TemporaryDirectory() as tmpdir:
cmd = 'sjaracne local -e ./tests/inputs/Tcell1170.exp -g ./tests/inputs/TcellTF.txt -n 5 -o {}'.format(tmpdir)
cmd = 'sjaracne local -e ./tests/inputs/Tcell1170.exp -g ./tests/inputs/TcellTF.txt -n 5 -pc 0.01 -o {}'.format(tmpdir)
exe = shlex.split(cmd)
subprocess.check_call(exe)
cmd2 = 'diff ./tests/answerkey/acceptance/cnn_5.txt {}/consensus_network_ncol_.txt'.format(tmpdir)
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