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@SBU-BMI @niflows @neuronets
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  1. ReproNim/neurodocker ReproNim/neurodocker Public

    Generate custom Docker and Singularity images, and minimize existing containers

    Python 321 96

  2. neuronets/nobrainer neuronets/nobrainer Public

    A framework for developing neural network models for 3D image processing.

    Python 148 46

  3. SBU-BMI/wsinfer SBU-BMI/wsinfer Public

    🔥 🚀 Blazingly fast pipeline for patch-based classification in whole slide images

    Python 52 9

  4. SBU-BMI/champkit SBU-BMI/champkit Public

    Benchmarking toolkit for patch-based histopathology image classification.

    Python 37 3